CF835382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_CENSY (Translation initiation factor 6 OS=Cenarchaeum symbiosum GN=eif6 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.211e-21 Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 125 TSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVF 640 TS+ R++G L V N +G+++P T ++ E + + VVV ++ + +ALGN I+ ND + RE IIAD LG+EV ++ +AG VG+ ++ GG++HP T ED+ +S ++ V + T+N G + +GL N + GS T+ E+ ++ F Sbjct: 50 TSVANTRLMGTLMVLNNSGIIMPSTISEIEYEFYKKHTDLNVVV--LDTKFTALGNMISVNDRGGVVSPVFPREEVRIIADALGIEVIQRRIAGYNQVGAMMVATSGGGIIHPETDGEDVKRISEVMGVHMEPATINGGIPFVSSGLLANKKSVVAGSFTSGPEIMMLTRAF 219
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.772e-21 Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2 Query: 116 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESV 637 V + ++ + ++G V N NG+LLP ++E++ L +L V + I + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T EL ++ V Sbjct: 48 VARFTVARSPLLGIFTVVNDNGVLLPPLVLEEEVR-LFKALGLNVDI--INTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELMRMQQV 218
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.434e-21 Identity = 61/174 (35.06%), Postives = 94/174 (54.02%), Query Frame = 2 Query: 116 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESV 637 V + ++ + ++G V N NG+LLP ++E++ L +L V V + + +A+ N I + VAL L+ +++ADVLGVEV T+AGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G+ VND A G +T E I+ V Sbjct: 48 VARLTVAKSPLLGIFTVVNDNGVLLPPMVLEEEIR-LFKALGLNVEV--LNTKYTAISNLILAGNKVALVSPLLEPSVRKVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVNDHGALVGDETAGPEFMRIQQV 218
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_METMJ (Translation initiation factor 6 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=eif6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.434e-21 Identity = 70/214 (32.71%), Postives = 103/214 (48.13%), Query Frame = 2 Query: 11 VAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 652 + ++++ +V G F + EL + +V T I G+ IIG L GN GL++ TD+EL L + V ++ ++A GN I ND VA H + + E I L V V R T+ G VG +N+G LVHP + ++ L ++ +P+ G+VN GS ++G GL N GS TT EL IE VF E Sbjct: 13 IGVYARVFEDIAIVYPGAPAEFTAALARELD--VEIVSTFIQGSSIIGSLVSGNSQGLVVSGLATDEELA----VLSEYRDVFLLKGPMNAAGNIILANDCVAAVHPEMQIDVAEEIGSFLEVPVVRLTLGGIKTVGMAGFATNKGILVHPRANDTEIANLERIVDLPIGLGSVNMGSGLVGTGLLANSKGYVAGSVTTGFELGRIEEVFGFLE 220
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_METHJ (Translation initiation factor 6 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=eif6 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.433e-20 Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = 2 Query: 83 TFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 652 T + E A + +V+T+I + IIG L VGN NGL++ T++E+ +L + + +EE ++A GN I NDH A H +D E + ++D L V V T+ VG +N G +V P T+ ++ L + +P+ GTV G+ ++G GL N + G T+ EL IE + E Sbjct: 35 TTRYEEALKVEIVRTTIQRSPIIGSLLVGNNNGLVITGMATEEEIA----TLSEYRDLMLLEEGMNAAGNIILANDHFAAVHPEMDEEFMDALSDFLKVPVIPLTLGDVKTVGMAAVATNSGVVVSPRTTPGEIQRLEQVCSLPVGKGTVTMGNAMVGTGLVANRYGYLAGVGTSGYELGRIEDILGFEE 220
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_METPE (Translation initiation factor 6 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=eif6 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.872e-20 Identity = 64/210 (30.48%), Postives = 103/210 (49.05%), Query Frame = 2 Query: 11 VAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVF 640 + F+++ +V S + + + L + +VKT + G+ IIG L GN G ++ E++ ++ + V +E ++A GN I ND +A H +D T E I VLGV V R T++G VG +NRG LVH ++ +L L + +P+ GT+N GS ++G GL N G +T+ E+ I VF Sbjct: 13 IGIFTRVLEDIAVVPPEASADYCAALKEALG--VTLVKTHVQGSSIIGSLVSGNSRGAIVSGLAYPDEIR----AIEEYREVMLLEGSMNAAGNVILANDQMAAVHPDMDNATIEQIHSVLGVPVIRLTLSGIKTVGMAGYATNRGILVHARSAGRELATLESTTDLPVGTGTINMGSGLVGTGLLANSTGYLAGIETSGFEMGRIADVF 216
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_THEVO (Translation initiation factor 6 OS=Thermoplasma volcanium GN=eif6 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.447e-20 Identity = 55/176 (31.25%), Postives = 93/176 (52.84%), Query Frame = 2 Query: 110 IPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESV 637 + + + SI G+ +IG + N NG++LP+ + L + D V ++++++A+GN I NDH A+ H + + I D LGVE R ++ + VGS +++G LV+P T ++L+ L +V + +GT N GS +GA + N G DTT E+ I+ V Sbjct: 46 VDIKRISIDGSTLIGTMIAVNSNGIVLPYGSNIDGLDGI-----DGRNVLYLKDKINAVGNDIIANDHGAIIHKAFSNKARKEIEDTLGVETIRTSIGNILTVGSASVLTSKGMLVNPETDDDELEFLKDFFKVSVKSGTANFGSIYVGASIVANSKGILVGRDTTPIEIDRIDDV 216
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_UNCMA (Translation initiation factor 6 OS=Uncultured methanogenic archaeon RC-I GN=eif6 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20 Identity = 61/172 (35.47%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 116 VVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 631 VV+T I + +IG + GN NG ++ T D+E N L + V R++ +++A GN I ND AL H L + E I L VEV R T+ G VG +N+G LVHP + E+L L L ++P+ GTV+ GS ++G+ + G+ T+ EL IE Sbjct: 46 VVRTLINESTLIGSMMTGNSNGFIVSDLTLDREA----NLLQEHGKVTRLKGKMTAAGNLILANDTAALVHPALTDKNIEAIEKTLKVEVRRGTIGGLKTVGMAGCATNKGILVHPRATEEELTVLEDLFKLPVDIGTVSFGSPLVGSAILATTKGLITGTRTSGPELGRIE 213
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_ARCFU (Translation initiation factor 6 OS=Archaeoglobus fulgidus GN=eif6 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20 Identity = 58/207 (28.02%), Postives = 104/207 (50.24%), Query Frame = 2 Query: 11 VAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 631 + ++K++ + +V + E Q +L + V+ T I G+ ++G + N G ++ EL+ L SL V IE ++ GN + ND +A+ ++ E +AD + +E+ + TV G VG +NRGGL +P+ + + +L + V ++ GTVN G++++G+GL N G DTT EL ++E Sbjct: 11 IGLYAKVSEEYAVVGVN-HEPLIDAIQEKLD--VDVIVTKIAGSELVGAMMALNSRGAVVSDQVLSSELRELEKSLDVLV----IETPMTCFGNNLLINDRGGIANPEMESSVVEKVADFMDIELVKGTVGGIKTVGMAAVVTNRGGLANPNINEWEAKKLQEVAGVEVLTGTVNFGTDMVGSGLVANSKGYVVGRDTTGFELGIVE 210
BLAST of CF835382 vs. ExPASy Swiss-Prot
Match: IF6_HALS3 (Translation initiation factor 6 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif6 PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.703e-19 Identity = 61/210 (29.05%), Postives = 100/210 (47.62%), Query Frame = 2 Query: 2 SCEVAFFSKLTNAFCLVAIGGSESFYSTFQAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEERLSALGNCIACNDHVALAHTYLDRETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 631 S + F++ T + LV + F + EL +P V+T++GG+ +G L GN +GLL+ + ++E + + V V + ++A GN + ND A H+ L + + + L V R +AG VG+ + G L HP + +L+ + L V GTVN G+ ++G+GL D G DTT E+ IE Sbjct: 9 SAYIGVFARATESCVLVRPDLDDDFVDSIADELG--VPAVQTTVGGSSTVGSLAAGNSSGLLVSNRIRERERDRIEAA---GVTVGELPGAVNAAGNVVVANDDGAYVHSGLSDDAVAAVEETLDVSATRGQLAGVDTVGTAAVATTDGVLCHPKATDAELERIEETLGVYADVGTVNYGAPLVGSGLVAADDGYLVGDDTTGPEIGRIE 213 The following BLAST results are available for this feature:
BLAST of CF835382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835382 ID=CF835382; Name=CF835382; organism=Citrus sinensis; type=EST; length=676bpback to top |