CF835383
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.637e-27 Identity = 55/108 (50.93%), Postives = 81/108 (75.00%), Query Frame = -3 Query: 311 FRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNA---IVDEMRKSLID 625 FR ++A N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ IG+GL VNDW AFCG +TTATE++V+E +F+LR ++ ++R +L+D Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_METST (Translation initiation factor 6 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=eif6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = -3 Query: 359 ETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 667 E + II + L VEV ++AG +VGS + +NRG LVHP S E+LD + +L VP GTVNRG +++GA + N G+ TT EL+ I+ VF L E Sbjct: 119 EAKRIIKNTLEVEVVETSIAGLDIVGSLVAATNRGALVHPDASEEELDLVEDVLGVPAEIGTVNRGVKLVGACIIANSNGVIVGNKTTGPELARIDQVFNLFE 221
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_AERPE (Translation initiation factor 6 OS=Aeropyrum pernix GN=eif6 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.134e-15 Identity = 43/96 (44.79%), Postives = 57/96 (59.38%), Query Frame = -3 Query: 380 ETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 667 E + ++D LGVEV +VAG VGS +NRGGL HP S E+L LS + +VP AGT+N G E + GL N + A G DTT E++ I+ Sbjct: 130 EALKTVSDTLGVEVVEGSVAGVYTVGSAIVVTNRGGLAHPDASEEELKFLSDVFKVPFEAGTINFGVEFVRTGLVANSYGALVGEDTTGPEIARIQ 225
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_PYRAE (Translation initiation factor 6 OS=Pyrobaculum aerophilum GN=eif6 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.414e-14 Identity = 41/95 (43.16%), Postives = 58/95 (61.05%), Query Frame = -3 Query: 374 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESV 658 +++ADVLGVEV T+AGN LVG+ ++RG LV P + +DL +LS +V + GTVNRG + G+ VND A G +T EL ++ V Sbjct: 124 KVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELMRMQQV 218
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_PYRAR (Translation initiation factor 6 OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=eif6 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = -3 Query: 374 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESV 658 +++ADVLGVEV T+AGN LVGS ++RG LV P + EDL +L+ + GTVN+G + G+ VND A G +T E I+ V Sbjct: 124 KVVADVLGVEVIVDTIAGNPLVGSLAVLNSRGVLVAPEATDEDLKKLAEYFKAKTDLGTVNKGKSFLRGGIVVNDHGALVGDETAGPEFMRIQQV 218
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_METBF (Translation initiation factor 6 OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=eif6 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 359 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 658 E+IA L VEV+R T+AG VG +N+G LVHP + +++ L L ++P+ GT N G++++G+GL N GSDTT EL IE E Sbjct: 120 EVIASTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTASEIETLEKLFELPVNIGTTNFGTQMLGSGLLANSKNYLAGSDTTGPELGRIEEALGFLE 219
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_PYRFU (Translation initiation factor 6 OS=Pyrococcus furiosus GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = -3 Query: 380 ETEEIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 667 E + I D+LGVEV R +AG + VGS +N+GGLVHP + E+L+ LS L +V + GT N G +G+ + N + G TT E+ IE Sbjct: 126 EEAKKIGDILGVEVERGVIAGIVAVGSAGVVTNKGGLVHPEATDEELEWLSDLFKVDVYVGTANMGVPYVGSCMLANSYGVVVGHLTTGPEIVKIE 221
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = -3 Query: 380 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIE 658 E+I+ VLGV+V R T+AG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL N GS+TT EL +E Sbjct: 119 EVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLANSKGYVAGSNTTGHELGRVE 211
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_METKA (Translation initiation factor 6 OS=Methanopyrus kandleri GN=eif6 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = -3 Query: 365 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKL 658 E+I VLG V R + G VGS +++G +VHP + E+++ +S +L V + GTVNRGS +G G+ VN A G DTT EL+ +E L Sbjct: 123 EVIESVLGGRVVRGELGGVKTVGSAGVANSKGAVVHPGATEEEMERVSEVLGVDVEVGTVNRGSPYVGVGIVVNSKGAVVGEDTTGPELARLEDALYL 220
BLAST of CF835383 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = -3 Query: 359 EIIADVLGVEVFRQTVAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE 658 EIIA L VEV+R T+AG VG +N+G LVHP ++ + + L + +P+ GT N G++++G+GL N GS+TT EL IE E Sbjct: 120 EIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLANSKNFVAGSETTGPELGRIEEALGFLE 219 The following BLAST results are available for this feature:
BLAST of CF835383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835383 ID=CF835383; Name=CF835383; organism=Citrus sinensis; type=EST; length=669bpback to top |