CF835413
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: OPA1_ONCMA (Dynamin-like 120 kDa protein, mitochondrial OS=Oncorhynchus masou GN=opa1 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.520e-14 Identity = 55/168 (32.74%), Postives = 86/168 (51.19%), Query Frame = 2 Query: 284 LESVVGRDFLPRGSG-IVTRRPLVLQLHQTEGGTDYAEFLHAPRK----KFTDFAAVRKEISDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLD 772 LE + PRGSG ++TR P+ + L +EG A F + R+ K D AA+R EI + + + +S I LS+ P + + L+DLPG+ G E I ++ ++Y++ P+ IIL I + D A +D + + P+GERT VLTK+D Sbjct: 317 LEMIAQARIFPRGSGEMMTRSPVKVTL--SEGPHHVAMFKDSSREFDLGKEEDLAALRHEIELRMRKSVKEGQTVSPETISLSVKGPGIQRMVLVDLPGVISTVTAGMAADTKETIFSISKNYMQNPNAIILCIQDGSVD-AEADRHRPGQSNGPAGERTIFVLTKVD 481
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP2A_ARATH (Dynamin-2A OS=Arabidopsis thaliana GN=DRP2A PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 51/167 (30.54%), Postives = 87/167 (52.10%), Query Frame = 2 Query: 284 LESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRK-KFTDFAAVRKEISDETDR-ITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQ--DIATSDAIKLAREVDPSGERTFGVLTKLD 772 L S++G LP G TR P++++L + + A L K + +A+R + D + +GK++ N+ ++ S P L L+DLPGL + V+ E+M+ Y + I+L I PA+Q +I++S A+K+A+E DP RT G++ K+D Sbjct: 55 LNSLIGHPVLPTGENGATRAPIIIELSRESSLSSKAIILQIDNKSQQVSASALRHSLQDRLSKGASGKNRDEINLKLRTSTAPP----LKLVDLPGLDQRIVD----------ESMIAEYAQHNDAILLVIVPASQASEISSSRALKIAKEYDPESTRTIGIIGKID 207
BLAST of CF835413 vs. ExPASy Swiss-Prot
Match: DRP2B_ARATH (Dynamin-2B OS=Arabidopsis thaliana GN=DRP2B PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 50/167 (29.94%), Postives = 87/167 (52.10%), Query Frame = 2 Query: 284 LESVVGRDFLPRGSGIVTRRPLVLQLHQTEGGTDYAEFLHAPRK-KFTDFAAVRKEISDETDR-ITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQPESIVEDIENMVRSYVEKPSCIILAISPANQ--DIATSDAIKLAREVDPSGERTFGVLTKLD 772 L S++G LP G TR P+++ L + E + A L K + +A+R + D + +G+ + + ++ S P L LIDLPGL + IV+D +M+ + + I+L + PA+Q +I++S A+K+A+E DP RT G+++K+D Sbjct: 55 LNSLIGHPVLPTGENGATRAPIIIDLSREESLSSKAIILQIDNKNQQVSASALRHSLQDRLSKGASGRGRDEIYLKLRTSTAPP----LKLIDLPGLD--------QRIVDD--SMIGEHAQHNDAILLVVVPASQASEISSSRALKIAKEYDPESTRTVGIISKID 207 The following BLAST results are available for this feature:
BLAST of CF835413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835413 ID=CF835413; Name=CF835413; organism=Citrus sinensis; type=EST; length=773bpback to top |