CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURXL (60 kDa chaperonin 2 OS=Burkholderia xenovorans (strain LB400) GN=groL2 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 70/150 (46.67%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RV+DAL+AT+AA LLR S + ++ T N ++ G IV RAL PL++IA NAG SVV KVLS + YGYNAATG Y DL+ G++DPTKV R L++A+S+A L +D V E + E A+PA P Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSAISSL--TGANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVVAKVLSGKGN-YGYNAATGEYGDLVETGVVDPTKVTRTALQNAASIAGLILTTDATVAEAPKEEKAVPAPAP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SYNP6 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL1 PE=3 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 65/150 (43.33%), Postives = 94/150 (62.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKV--LSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 K++KLR+EDA+NATKAA TL L+ +++ + EE GA IV RAL PLK IA+NAG+NG+V+SE+V L D GY+A+ + ++ AGI+DP KV R L++A+S+A L ++C+VV+ EP+ PAG Sbjct: 388 KDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDE---GYDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECIVVDKPEPKEKAPAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_AZOSB (60 kDa chaperonin 1 OS=Azoarcus sp. (strain BH72) GN=groL1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.165e-25 Identity = 69/157 (43.95%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA--MPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + + +K DN ++ G IV RA+ PL+ I NAG SVV KV+ + +GYNAATG Y D++ G++DPTKV R L++A+SVA L +DC+V E+ E +PA MP M G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARASLAGLKG--DNHDQDAGIKIVLRAMEQPLREIVANAGDEASVVVNKVVEGSGN-FGYNAATGEYGDMVEMGVLDPTKVTRTALQNAASVASLMLTTDCMVGELAEDKPAGGMPGMGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHOS5 (60 kDa chaperonin OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=groL PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE+K RV+DALNAT+AA L++ +D + T +N ++ G IV+RAL PL+ IA+NAGV+GSVV+ KV SD+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + EP+ A PAG Sbjct: 390 KERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGL--TGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESDDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIADKPEPKSA-PAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHOPA (60 kDa chaperonin OS=Rhodopseudomonas palustris GN=groL PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 65/148 (43.92%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE+K RV+DALNAT+AA L++ +D + T +N ++ G IV+RAL PL+ IA+NAGV+GSVV+ KV SD+ +G+NA T Y D+ G+IDP KVVR LE A+SVA + ++ ++ + EP+ A PAG Sbjct: 390 KERKDRVDDALNATRAAVQEGIVVGGGVALIQAGKVLDGL--TGENPDQNAGITIVRRALEAPLRQIAQNAGVDGSVVAGKVRESDDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVASLLITTEAMIADKPEPKSA-PAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PORG3 (60 kDa chaperonin OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=groL PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KEKK RVEDAL+AT+AA +R + ++ +K +N++E G +IVKRA+ PL+ I NAG G+VV +KV + +GYNA T +E+L + G+IDP KV R LE+A+S+A FL ++CV+ + KE PA PA Sbjct: 390 KEKKDRVEDALSATRAAIEEGTVPGGGTAYIRAIAALEGLKG--ENEDETTGIEIVKRAIEEPLRQIVANAGKEGAVVVQKVKEGKDD-FGYNARTDVFENLYSTGVIDPAKVTRVALENAASIAGMFLTTECVIADKKEDNPAAPA 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LACBA (60 kDa chaperonin OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=groL PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNP 452 KE+K R+EDALNAT+AA L+ + V ++ D EK G +IV RAL P++ IA+NAGV GSVV E L + GYNAA YED++AAGI DPTKV R L++A+SV+ L ++ VV E E P PA PA NP Sbjct: 388 KERKYRIEDALNATRAAVEEGFVAGGGTALINVIGDVAKLEAEGD---EKTGINIVLRALEEPVRQIAQNAGVEGSVVVEH-LKGEKPGVGYNAADNKYEDMVAAGITDPTKVTRSALQNAASVSALLLTTEAVVAEKPEDNPAPAAPAANP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CRIGR (60 kDa heat shock protein, mitochondrial OS=Cricetulus griseus GN=HSPD1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 67/148 (45.27%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPA 443 EKK RV DALNAT+AA C LLR +D++K + N+++K+G +I+KRAL P IAKNAGV GS++ EK+L S + + GY+A G++ +++ GIIDPTKVVR L A+ VA ++ VV EI +E +P M A Sbjct: 416 EKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPS--NEDQKIGIEIIKRALKIPAMTIAKNAGVEGSLIVEKILQSSS-EIGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEAVVTEIPKEEKDPGMGA 560
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH604_BRASB (60 kDa chaperonin 4 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL4 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 60/154 (38.96%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPM 455 KE+K RV+DA++AT+AA LLR S ++ ++ N+++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ TG+Y ++++ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMP G M Sbjct: 390 KERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKGLRTK--NEDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYAYGFDSQTGDYVNMVSKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKNAGGPAMPPGGGM 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_SPHAL (60 kDa chaperonin 1 OS=Sphingopyxis alaskensis GN=groL1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 64/149 (42.95%), Postives = 96/149 (64.43%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN 449 KE+K RV+DAL+AT+AA LL + ++ +K ND++ G DI+++A+ PL+ IA NAG +G+VV+ +L + + G+NAAT YE+L AAG+IDPTKVVR L+ A+SVA + ++ V E+ E +PAMP G+ Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKGA--NDDQTRGIDIIRKAIETPLRQIAANAGHDGAVVAGNLLRVGDVEQGFNAATDVYENLKAAGVIDPTKVVRTALQDAASVAGLLITTEAAVSELPEDKPAMPMGS 536 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |