CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 62/149 (41.61%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPA 443 KEKK R+EDAL+AT+AA TLLR V+ TL DE K+GA +V ++L P+K I +NAG+ +++ EK++ D+ KYGY+ Y ++ +GIIDPTKV R L++A+S+A L ++ +V E + E P MPA Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVAGGGVTLLRAKKAVEEFANTLSGDE-KIGAQLVAKSLDAPVKQIIRNAGLEPAIIIEKIIEKDDSKYGYDVLKERYVNMFESGIIDPTKVTRSALQNAASIASMLLTTEVLVAEEPKEEKGPEMPA 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_OCHA4 (60 kDa chaperonin OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 66/157 (42.04%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DALNAT+AA LLR S+K+ A + ++ D+E G +IV+RAL P + I NAG SV+ K+L + + YGYN A G + DL+ AG++DP KVVR L++A+SVA + ++ ++ E+ + + A PAG P G G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVAGGGTALLRASAKISA--KGINADQE-AGINIVRRALQAPARQITTNAGEEASVIVGKILENASETYGYNTANGEFGDLIKAGVVDPVKVVRTALQNAASVAGLLITTEAMIAELPKKD-AAPAGMPGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KE+K RV+DAL+AT+AA LL + ++ +K ND++ G DIV+RA+ P++ IA NAG +G+VVS +L ++ G+NAAT YE+L AAG+IDPTKVVR L+ A+SV+ + ++ + E + +PAMP Sbjct: 390 KERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKGA--NDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKPDDKPAMP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METSS (60 kDa chaperonin OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSGY 470 KEKK RV+DAL+AT+AA LLR S++ +K DN ++ G IV RA+ PL+ IA NAG SVV KVL+ + +GYNAATG Y DL+ G++DPTKV R L++A+SVA L +D + E+ KE + A+PA M + GY Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSRIVNLKG--DNGDQDAGIRIVLRAIEAPLRAIAANAGDEPSVVINKVLAGSGN-FGYNAATGEYADLVETGVVDPTKVTRTALQNAASVASLILTTDASIAELPKEEKAAVPA---MPDMGY 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRAP2 (60 kDa chaperonin OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KEKK RV+DAL+AT+AA L+R +D + DND++ G ++K+A+ PL+ I NAG SVV +V + + + YGYNAA Y D++ GI+DPTKV R L+HA+S+A + ++ +V EIKE PAMP G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGLVG--DNDDQNHGIALLKKAIEAPLRQIVSNAGGESSVVVNEVKAKEGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVAEIKEDAPAMPMG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK R+EDAL+ATKAA L+R +D IK +DN++E++G +IV+R+L PLKLIA NAG GS+++EKV D GY+AA + ++ AGI+DP KV R L++A+S+A L ++ +V E E E P P Sbjct: 390 KEKKHRIEDALSATKAAVEEGIVPGGGVALIRTIKALDDIK--VDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDG-PMGYDAARDRFVNMFDAGIVDPCKVTRSALQNAASIAALVLTTEGLVAEKPEKEKQTPPPPP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BART1 (60 kDa chaperonin OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=groL PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 65/151 (43.05%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 446 KEKK RV+DALNAT+AA LLR +S A+ N +++ G +IV+RAL P + IA NAG +++ KVL ++ YGYN ATG + DL+A GI+DP KVVR L++A+S+A + ++ +V E+ + P P MPAG Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVAGGGTALLRAAS---ALTVKGGNPDQEAGINIVRRALQAPARQIATNAGEEAAIIVGKVLENNADTYGYNTATGEFGDLIALGIVDPVKVVRSALQNAASIASLLITTEAMVAEMPKKDTPMPPMPAG 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SORC5 (60 kDa chaperonin 2 OS=Sorangium cellulosum (strain So ce56) GN=groL2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSGYGY 476 KEKK RVEDAL+AT+AA L+R S ++ +K NDE++ G +I++RA+ PL+ I+ NAG GS+V +KV + YGYNAA+G+Y +L+ G+IDP KVVR L++A+SVA L ++ ++ E KE +PA AG ++G+G+ Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRAQSSLEKLKV---NDEQRFGVNIIRRAIEEPLRQISANAGEEGSIVVQKVRDGKD-SYGYNAASGDYGNLLEMGVIDPVKVVRSALQNAASVASLMLTTEALIAERPKEEKPA--AGGA--HAGHGH 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHOP5 (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisA53) GN=groL2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.050e-25 Identity = 60/157 (38.22%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DA++AT+AA LLR S ++ +K ND++K G +IV++AL +P + IA NAG +GSV+ K+L D + YG+++ +G Y +L++ GIIDPTKVVR +++A+SVA + ++ ++ E+ P+ G G G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTK--NDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYNYGFDSQSGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMIAEL--PKKGNSGGGMPPGGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEBR (60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 63/146 (43.15%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK R+EDAL ATKAA LL + V + ++L+ D K GA IV RAL P++ IA NAGV+GSV+ EK+ ++ + +GY+A + D+ AGI+DPTKV R L++A+S+A L ++ +VV+I E MP Sbjct: 388 KEKKHRIEDALAATKAAVEEGIVPGGGIALLNVIEDVQKVVDSLEGDF-KTGAKIVLRALEEPVRQIATNAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAASIASMILTTEAIVVDIPEKNTGMP 532 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |