CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SYMTH (60 kDa chaperonin OS=Symbiobacterium thermophilum GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN 449 KEKKLR+EDALNAT+AA LL+ +D + +TL+ DE KVGA IV+RA+ PL+ I +N G+ GSVV EKV + +G++A Y D++AAGIIDP KV R L++A+S+A L ++ +V E E + PA N Sbjct: 390 KEKKLRIEDALNATRAAVEEGIVAGGGVALLQTQKAIDELIKTLEGDE-KVGAQIVRRAVEEPLRCIVENGGLEGSVVVEKVRTLPVG-HGFDAMKEEYVDMVAAGIIDPVKVTRSALQNAASIAALILTTEALVTEKPEKKENNPAPN 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 67/152 (44.08%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 446 KEKK RVEDAL+AT+AA L+R + +DA +N+++K G DI++RAL PL+ I N G +G+VV EKV +S+ YG+NA T Y +L+ AG++DPTKV R LE+A+SVA L ++ + +IKE P MP G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVAGGGVALIRAAKALDATNP--ENEDQKTGVDIIRRALEEPLRQIVANTGTTDGAVVVEKVKNSEGD-YGFNARTEEYMNLIEAGVVDPTKVTRTALENAASVAGILLTTEAAITDIKEDGSDMPPMPGG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIMF (60 kDa chaperonin OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PAMP M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIMA (60 kDa chaperonin OS=Neisseria meningitidis serogroup A GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 66/155 (42.58%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PAMP M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METFK (60 kDa chaperonin OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 69/158 (43.67%), Postives = 90/158 (56.96%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAGNPMDNSGY 470 KEKK RVEDAL+AT+AA LLR S + +K DN ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA+ G Y DL+ G++DP KV R L++A+SVA L +D +V E+ +E PAMP M G+ Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARSSIKELKG--DNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGN-YGYNASNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAELPKEEAAPAMPDAGGMGGMGF 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_GEOSL (60 kDa chaperonin OS=Geobacter sulfurreducens GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 66/151 (43.71%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE---IKEPEPAMPAG 446 KEKK RVEDAL+AT+AA LR + +DA+ E++ G +++KR+L P++ IA+NAGV+GS+V +KV +S + +GYNAA Y D++AAGIIDPTKV R L++A+SVA L ++ ++ + + P PAMP G Sbjct: 390 KEKKARVEDALHATRAAVDEGIVPGGGVAYLRALASLDALSLPT---EQQFGVNVIKRSLEEPIRQIAQNAGVDGSIVVDKVKNSKD-AFGYNAAEDEYVDMLAAGIIDPTKVSRSALQNAASVAGLMLTTEAMIADKPKEEAPMPAMPGG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_GEOSF (60 kDa chaperonin OS=Geobacter sp. (strain FRC-32) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 65/147 (44.22%), Postives = 94/147 (63.95%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KEKK RVEDAL+AT+AA LR S +DA+ E++ G +++KRAL P++ IA+NAGV+GS+V +KV + + +GYNAA Y D++ AGIIDPTKV R L++ASS+A L ++ ++ + + E AMPA Sbjct: 389 KEKKARVEDALHATRAAVDEGIVPGGGVAYLRAMSTLDALNLPT---EQQFGVNVIKRALEEPIRQIAQNAGVDGSIVVDKVKNGKD-AFGYNAADDEYVDMIQAGIIDPTKVSRSALQNASSIAGLMLTTEAMIADKPKEEGAMPA 531
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-GNPMD 458 KE+KLR+EDAL ATKAA + + +V+ K T D + ++G I+ ++L PL+ IA NAGV GSV+ EKV +S+ GY+A G Y +++ +GI+DPTKV R L++A+SV+ TFL ++ V EI + EPAMPA G MD Sbjct: 388 KERKLRIEDALAATKAAVEEGIVPGGGTAYINVIKEVE--KLTSDVQDTELGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGT-GYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKEPAMPAPGMGMD 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLL2 (60 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 67/159 (42.14%), Postives = 98/159 (61.64%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLR-LSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + +A+ DN+++K G +I++RAL PL+ I N G +G+VV EKV +++ +G+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + +IKE + MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLANAVA---DNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEKVKAAEGD-FGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDIKEEKSDMPAMPPGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BARQU (60 kDa chaperonin OS=Bartonella quintana GN=groL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 65/157 (41.40%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DALNAT+AA LLR ++ + AIK + N +++ G +IV+RAL P + IA NAG +++ KVL ++ +GYN ATG + DL+A GI+DP KVVR L++A+S+A + ++ +V E+ + + MP PM G G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVAGGGTALLRAANAL-AIKGS--NPDQEAGINIVRRALQAPARQIATNAGEEAAIIVGKVLENNADTFGYNTATGQFGDLIALGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKDTPMP---PMPGGGMG 540 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |