CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROMM (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.207e-25 Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA----GNPMDNSG 467 K +KLR+EDALNAT+AA TLL LS + + E L ND+++ G +IV+RAL P + IA NAG NG VV ++ + G+NA + YEDL+ AGI+D TKVVR L+ A S+A + ++ V+ + +PEP PA G+PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGTTLLHLSKGLSKLAEQL-NDDQRTGVEIVQRALSAPARQIAINAGENGDVVISEIQRLNK---GFNAISSTYEDLLEAGILDATKVVRLALQDAVSIASMMVTTELVIAD--KPEPPAPAGDGGGDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-GNPMDNSGY 470 EKK RV DALNATKAA LL S ++D + N ++K+G I++ AL P+ IA NAGV G+VV K+L DN GY+AA G Y D++ AGIIDP KV+R L A+SV+ ++ +VVE+ + E +PA G M Y Sbjct: 422 EKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTA--NFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLMTTTEAIVVELPKDEKEVPAMGGGMGGMDY 575
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R +D + DN+++K G +I++RAL PL+ I N G +G+VV E+V + +G+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + ++KE + MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLD--RAIADNEDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLERVKAGTGD-FGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEAAITDVKEEKSDMPAMPPGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_METI4 (60 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 67/150 (44.67%), Postives = 96/150 (64.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 446 KEKK RVEDAL+AT+AA LLR ++ + +L DE+ +GA+IV +AL YPLK +A NAG+ GSV+ +V + ++ G++ A +Y D+ AGI+DPTKV R LE+A+S+A L ++ +V EI KE +PA PAG Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRCQKAIEGL--SLKGDEQ-IGANIVYKALEYPLKTLADNAGLEGSVIVNEVKAKKGNE-GFDVAKRSYVDMFEAGIVDPTKVTRTALENAASIAGLLLTTEAMVTEIPEKEKKPATPAG 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LACSS (60 kDa chaperonin OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K R+EDALNAT+AA L+ + V A++E D + G +IV RAL P++ IA NAG+ GSV+ EKV S + GYNAA GN+E+++ AGI+DPTKV R L++A+SVA L ++ VV + E PA AG MD S G Sbjct: 388 KEQKYRIEDALNATRAAVEEGYVAGGGTALIDVIESVAALEEEGD---VQTGINIVLRALEEPVRQIATNAGLEGSVIVEKV-KSQPVEVGYNAANGNWENMIEAGILDPTKVTRSALQNAASVAALMLTTEAVVADKPEDNPAPAAG--MDPSAMG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATT (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis GN=groL PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 KEKK RV+DAL+AT+AA L+R +D + T +ND++ G ++++A+ PL+ I NAG SVV +V ++ + YGYNAA Y D++ GI+DPTKV R L+HA+S+A + ++ ++ EIKE PAMP G M Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNYGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRAT1 (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 KEKK RV+DAL+AT+AA L+R +D + T +ND++ G ++++A+ PL+ I NAG SVV +V ++ + YGYNAA Y D++ GI+DPTKV R L+HA+S+A + ++ ++ EIKE PAMP G M Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNYGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 68/148 (45.95%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE KLR+EDALNAT+AA + S KV + +TL DE K+GA I+ +AL PL IA NAG+ G+V+ KV S+ G++A Y +++ AGI+DP KV R L++A+SVA T L ++ VV IKE PAMPAG Sbjct: 388 KEAKLRMEDALNATRAAVEEGVVSGGGSAYIHASKKVAELVKTLSGDE-KIGAQIILKALEAPLFHIAYNAGLEGAVIINKVRESEVGT-GFDAYKEEYVNMIDAGILDPAKVTRSALQNATSVASTLLTTESVVANIKEDAPAMPAG 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 68/153 (44.44%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-GNPMD 458 KE+KLR+EDAL ATKAA + + + V+ K T D + ++G I+ ++L PL+ IA NAGV GSV+ EKV +S+ GY+A G Y +++ +GI+DPTKV R L++A+SV+ TFL ++ V EI + EPAMPA G MD Sbjct: 388 KERKLRIEDALAATKAAVEEGIVPGGGTAYINVINAVE--KLTSDVQDTELGIKIIVKSLEEPLRQIASNAGVEGSVIIEKVKNSEVGT-GYDALYGKYVNMIKSGIVDPTKVTRSALQNAASVSATFLTTEAAVAEIPQKEPAMPAPGMGMD 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BORA1 (60 kDa chaperonin OS=Bordetella avium (strain 197N) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 64/147 (43.54%), Postives = 87/147 (59.18%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KEKK RVEDAL+AT+AA LLR + ++ D ++ G ++ RA+ PL+ I NAG SVV VL+ + YGYNAATG Y DL+ G++DPTKV R L++A+SVA L ++ VVE+ E +PA PA Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALLRAKQAIAGLQG--DTPDQNAGIKLILRAVEEPLRTIVTNAGEEASVVVNNVLNGKGN-YGYNAATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPA 533 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |