CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AZOSE (60 kDa chaperonin OS=Azoarcus sp. (strain EbN1) GN=groL PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + + +K DN ++ G IV RAL PL+ I NAG SVV +V+ + +GYNAATG Y DL+ G++DPTKV R L++A+SVA L +DC+V E+ E +P+M M G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARANLGTLKG--DNHDQDAGIKIVLRALEQPLREIVANAGDEPSVVVNRVVEGTGN-FGYNAATGEYGDLVDMGVLDPTKVERIALQNAASVAGLMLTTDCMVGELAEEKPSMGGMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHIME (60 kDa chaperonin 2 OS=Rhizobium meliloti GN=groL2 PE=2 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 61/154 (39.61%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR+ S ++ + ND+++VG +IV+RA+ P++ IA+NAG GS++ K+ + +G+NA TG + DL G+IDP KVVR L+ A+S+A + ++ ++ E K+ +P MP G MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRVVSALNGLATA--NDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKQDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASIAGLLVTTEAMIAEKPKKDGQPQMPPGGGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BRASO (60 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain ORS278) GN=groL2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 59/154 (38.31%), Postives = 99/154 (64.29%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPM 455 KE+K RV+DA++AT+AA LLR S ++ ++ N+++K G +IV++AL P + IA NAG +GSV+ K+L + + YG+++ +G+Y ++++ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMP G M Sbjct: 390 KERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKGVRTK--NEDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYAYGFDSQSGDYVNMVSKGIIDPTKVVRTAIQNAASVASLLITTEAMVAELPKKAAAGPAMPPGGGM 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_AZOC5 (60 kDa chaperonin 1 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.203e-24 Identity = 67/157 (42.68%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DALNAT+AA LLR V+A+ +N + G IV RAL P++ IA+N+GV GS+V KVL S+ + +G+NA T Y DL+A G++DP KVVR L+ ASSVA + ++ ++ E+ + + MPA M G G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVPGGGVALLRAKKAVEALSS--ENPDIAAGIKIVLRALEAPIRQIAENSGVEGSIVVGKVLESEGN-FGFNAQTEQYVDLVAEGVVDPAKVVRTALQDASSVASLLVTTEALIAELPKKDAGMPA---MPGGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RALSO (60 kDa chaperonin OS=Ralstonia solanacearum GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 66/150 (44.00%), Postives = 89/150 (59.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAG 446 KEKK RVEDAL+AT+AA LLR + + +K N ++ G IV RA+ PL+ I NAG SVV V++ + YGYNA+TG Y DL+ G++DPTKV R L++A+SVA L +DC V E+ + + PAMP G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALLRARALISGLKGA--NADQDAGIKIVLRAMEEPLRQIVTNAGDEASVVVANVIAGKGN-YGYNASTGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAELPKDDAAPAMPGG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_JANMA (60 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + AIK DN +++ G IV RA+ PL++I +NAG SVV KVL + +GYNAA G Y D++ G++DP KV R L++A+S+A L +DC+V E+ E + A G+ G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARA---AIKIKGDNPDQEAGIRIVLRAMEEPLRMIVQNAGEEASVVVAKVLEGKGN-FGYNAANGTYGDMVEMGVLDPAKVTRSALQNAASIAALLLTTDCMVAEVAEDKAAGGMGDMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATN (60 kDa chaperonin OS=Francisella tularensis subsp. novicida (strain U112) GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 63/151 (41.72%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 KEKK RV+DAL+AT+AA L+R +D + T +ND++ G ++++A+ PL+ I NAG SVV +V ++ + YGYNAA Y D++ GI+DPTKV R L+HA+S+A + ++ +V EIKE PAMP G M Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMVGEIKEAAPAMPMGGGM 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_EMIHU (60 kDa chaperonin, chloroplastic OS=Emiliania huxleyi GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 63/138 (45.65%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV-DAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE 413 K++KLR+EDA+NATKAA TL+ +++++ + +KETL DE +G IV++AL PLK IA NAG NGS++ E++ SD + GYNAAT D+ AGIIDP KV R L++A+S+A L ++C++V+ Sbjct: 390 KDRKLRLEDAVNATKAAVEEGIVPGGGTTLIHIAAELLEWVKETLTGDE-LLGGLIVEKALQAPLKKIALNAGENGSIIVERIKESD-FEIGYNAATNEIVDMYEAGIIDPAKVTRSTLQNAASIASMILTTECIIVD 525
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DICNV (60 kDa chaperonin OS=Dichelobacter nodosus (strain VCS1703A) GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + +K DN +++VG DI +RA+ YPL+ I NAG +VV E+V S + GY+AATG Y D++AAGIIDPTKV R L++A+SVA + ++ +V EI + E G+ D G G Sbjct: 390 KEKKDRVEDALHATRAAVEEGIVPGGGVALIRAINSIVDLKG--DNYDQQVGIDIARRAMEYPLRTIVSNAGSEAAVVLERVKSGKGND-GYDAATGQYVDMVAAGIIDPTKVTRSALQNAASVAGLMITTEAMVSEIPQKE----EGHHHDMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESHY (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groL PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKKLR+EDAL AT+AA C L+ + +D++K T D EK G IV RAL PL+ IA NAG GS+V EKV + G+NA T YED++AAGI+DP KV R L++A+S+A L ++C+V +I + A M G Sbjct: 388 KEKKLRIEDALAATRAAVEEGIVAGGGCALVDAAKALDSLKLTGD---EKTGVAIVYRALEEPLRQIANNAGFEGSIVVEKVRNG-GRGVGFNALTEAYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTECLVSDIPSKDNGAAAMAGMGGMG 538 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |