CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DEIGD (60 kDa chaperonin OS=Deinococcus geothermalis (strain DSM 11300) GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNY-EDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 476 KEKK R EDAL+ ++A TLLR+ V + E+L+ DE GA I+ RAL P + IA NAG GSV+ VL+SD +YGYNAATG + +D++AAGI+DP KV R L++A+S+ L ++ +V + E E A A D G + Sbjct: 388 KEKKHRYEDALSTARSAVEEGIVAGGGTTLLRVIPAVKQLAESLEGDEA-TGARILVRALEEPARQIAANAGDEGSVIVNAVLNSDKPRYGYNAATGEFVDDMVAAGIVDPAKVTRTALQNAASIGGLILTTEAIVSDKPEKEKAPAAAGAPDMGGMDF 545
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOBO (60 kDa chaperonin OS=Clostridium botulinum GN=groL PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KE+KLR+EDAL ATKAA LR +V+ K T +N E ++G I++RAL P++ IA NAG+ GSV+ +K+++ G++A G Y +++ GI+DP KV R L++A+SVA TFL ++CVV EI E PA A Sbjct: 388 KERKLRIEDALAATKAAVEEGIVAGGGTAYLRAIKEVE--KLTDNNSEIRLGIAIIRRALEEPVRQIASNAGLEGSVIIDKIMNGQEGM-GFDALEGEYVNMVQKGIVDPAKVTRSALQNAASVASTFLTTECVVAEIPEKNPAPQA 531
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH607_BRAJA (60 kDa chaperonin 7 OS=Bradyrhizobium japonicum GN=groL7 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAGNPM 455 KEKK RVEDALNAT+AA LLR V + T ND+ + G +IV +AL P++ I++NAGV GS+V K+L + + +G++A +Y D++ GIIDP KVVR L+ ASSVA + ++ +V E K+ PAMPAG M Sbjct: 390 KEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRL--TNANDDVQAGINIVLKALEAPIRQISENAGVEGSIVVGKILENKSETFGFDAQNEDYVDMVEKGIIDPAKVVRTALQDASSVAGLLVTTEAMVAEAPKKDAPPAMPAGGGM 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_VIBC3 (60 kDa chaperonin 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=groL2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 65/147 (44.22%), Postives = 94/147 (63.95%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMP 440 KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + + YGYNAATG Y+D++ GI+DPTKV R L+ A+SVA + ++ ++ E+ K+ PAMP Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALIRAASKLSSLVG--DNEEQNVGIRVALRAMEAPLRQIVKNAGDEESVVANNVRAGEGN-YGYNAATGVYDDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITELPKKDAPAMP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHOPA (60 kDa chaperonin 2 OS=Rhodopseudomonas palustris GN=groL2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 60/150 (40.00%), Postives = 94/150 (62.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KE+K RV+DA++AT+AA LLR S ++ +K ND++K G +IV+RAL P + IA NAG +GSV+ KVL + + +G+++ +G Y DL+ GIIDPTKVVR +++A+SVA + ++ ++ E+ + A G P Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLKTK--NDDQKTGVEIVRRALSAPARQIAINAGEDGSVIVGKVLEKEQYAFGFDSQSGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMIAELPKKGGAGAGGMP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROMT (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL2A) GN=groL2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP--EPAMPAGNPMDNSG 467 K +KLR+EDALNAT+AA TLL LS + + + L+ D+ K G +I+KRAL P K IA NAG NG VV + G+NA TG YEDL+ AGI+D +KV+R L+ A S+A + ++ V+ + EP P G+PM G Sbjct: 388 KNRKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLEGDQ-KTGVEIIKRALTAPTKQIAINAGFNGDVVVSDIKRLGK---GFNAQTGEYEDLLEAGILDASKVIRLALQDAVSIASLLITTEVVIADKPEPPSAPGAEGGDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROM0 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.571e-24 Identity = 66/155 (42.58%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 K KKLR+ED+LNATKAA TL+ +S + + +T D+ + G +IVK AL P K IAKNAG NG VV ++ + G+NA +G YEDL +GI+DPTKV+R L+ + S+A L ++ + +I EPE A P G D G Sbjct: 388 KYKKLRIEDSLNATKAAIEEGVVSGGGQTLIEISDDLLNLSKT-STDDLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEIKRLNK---GFNANSGKYEDLKDSGILDPTKVIRLALQDSVSIAAMLLTTEVAMADIPEPEAAGPGGPGADPMG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DA++AT+AA LL + +D K T N+++K G DIV++AL P++ IA+NAG +GSV+ K+L +G+NA G Y D+ G+IDPTKVVR L+ A+SVA + ++ ++ E +PE PAG P G G Sbjct: 390 KERKDRVDDAMHATRAAVEEGIVAGGGVALLYATKALD--KLTAVNEDQKFGIDIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFGFNAQAGEYGDMFKFGVIDPTKVVRAALQDAASVAGLLITTEAMIGE--KPEKKAPAGAPGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RALME (60 kDa chaperonin OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=groL PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 67/150 (44.67%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPAG 446 KEKK RVEDAL+AT+AA LLR + + + +N ++ G IV RA+ PL+ I NAG SVV KV+ + YGYNAA+G Y DL+ G++DPTKV R L++A+SVA L +DC V E +E PAMP G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAIAGLHG--ENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGN-YGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESAPAMPGG 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIGO (60 kDa chaperonin OS=Neisseria gonorrhoeae GN=groL PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PA+P M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |