CF835719

Overview
NameCF835719
Unique NameCF835719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIG2 (60 kDa chaperonin OS=Neisseria gonorrhoeae (strain NCCP11945) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467
            KEKK RVEDAL+AT+AA            LLR  + ++ +     N ++  G  IV RA+  PL+ I  NAG   SVV  KVL    + YGYNA +G Y D++  G++DP KV R  L+HA+S+A   L +DC++ EI E +PA+P    M   G
Sbjct:  390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMG 541
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIG1 (60 kDa chaperonin OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467
            KEKK RVEDAL+AT+AA            LLR  + ++ +     N ++  G  IV RA+  PL+ I  NAG   SVV  KVL    + YGYNA +G Y D++  G++DP KV R  L+HA+S+A   L +DC++ EI E +PA+P    M   G
Sbjct:  390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMG 541
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATW (60 kDa chaperonin OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455
            KEKK RV+DAL+AT+AA            L+R    +D +  T +ND++  G  ++++A+  PL+ I  NAG   SVV  +V ++  + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ ++ EIKE  PAMP G  M
Sbjct:  390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATO (60 kDa chaperonin OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455
            KEKK RV+DAL+AT+AA            L+R    +D +  T +ND++  G  ++++A+  PL+ I  NAG   SVV  +V ++  + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ ++ EIKE  PAMP G  M
Sbjct:  390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATM (60 kDa chaperonin OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455
            KEKK RV+DAL+AT+AA            L+R    +D +  T +ND++  G  ++++A+  PL+ I  NAG   SVV  +V ++  + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ ++ EIKE  PAMP G  M
Sbjct:  390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATH (60 kDa chaperonin OS=Francisella tularensis subsp. holarctica (strain LVS) GN=groL PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455
            KEKK RV+DAL+AT+AA            L+R    +D +  T +ND++  G  ++++A+  PL+ I  NAG   SVV  +V ++  + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ ++ EIKE  PAMP G  M
Sbjct:  390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FRATF (60 kDa chaperonin OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455
            KEKK RV+DAL+AT+AA            L+R    +D +  T +ND++  G  ++++A+  PL+ I  NAG   SVV  +V ++  + YGYNAA   Y D++  GI+DPTKV R  L+HA+S+A   + ++ ++ EIKE  PAMP G  M
Sbjct:  390 KEKKDRVDDALHATRAAVEEGIVAGGGVALIRAQKALDGL--TGENDDQNHGIALLRKAIEAPLRQIVSNAGGESSVVVNQVKANQGN-YGYNAANDTYGDMVEMGILDPTKVTRSALQHAASIAGLMITTEAMIGEIKEAAPAMPMGGGM 537
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DROME (60 kDa heat shock protein, mitochondrial OS=Drosophila melanogaster GN=Hsp60 PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = 3 
Query:    6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMDNSG 467
            EKK RV DALNAT+AA            LLR   K++ ++ T  N+++K+G +IV+RAL  P   IAKNAGV+G++V  KV  +    YGY+A  G Y +L+  GIIDPTKVVR  +  AS VA     ++ VV EI + +  PAMP    M   G
Sbjct:  412 EKKDRVHDALNATRAAVEEGIVPGGGTALLRCIEKLEGVETT--NEDQKLGVEIVRRALRMPCMTIAKNAGVDGAMVVAKV-ENQAGDYGYDALKGEYGNLIEKGIIDPTKVVRTAITDASGVASLLTTAEAVVTEIPKEDGAPAMPGMGGMGGMG 564
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DESHD (60 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 68/155 (43.87%), Postives = 91/155 (58.71%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467
            KEKKLR+EDAL AT+AA          C L+  +  +D++K T D   EK G  IV RAL  PL+ IA NAG  GS+V EKV +      G+NA T  YED++AAGI+DP KV R  L++A+S+A   L ++C+V +I   +    A   M   G
Sbjct:  388 KEKKLRIEDALAATRAAVEEGIVAGGGCALVDAAKALDSLKLTGD---EKTGVAIVCRALEEPLRQIANNAGFEGSIVVEKVRNG-GRGVGFNALTEAYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTECLVSDIPSKDNGAAAMAGMGGMG 538
[Close]
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DECAR (60 kDa chaperonin OS=Dechloromonas aromatica (strain RCB) GN=groL PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24
Identity = 68/157 (43.31%), Postives = 92/157 (58.60%), Query Frame = 3 
Query:    3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473
            KEKK RVEDAL+AT+AA            L+R  + V  +K   DN ++  G  IV RA+  PL+ I  NAG   SVV +KV     + YGYNA+TG Y D++  G++DPTKV R  L++A+SVA   L ++C+V E+ E +   PAG   D  G G
Sbjct:  390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARAAVGKLKG--DNHDQDAGIKIVLRAMEQPLREIVANAGDEPSVVVDKVQRGKGN-YGYNASTGEYGDMVEMGVLDPTKVTRTALQNAASVAGLMLTTECMVAELAEDK---PAGGMPDMGGMG 540
The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_NEIG22.051e-2441.9460 kDa chaperonin OS=Neisseria gonorrhoeae (strain... [more]
CH60_NEIG12.051e-2441.9460 kDa chaperonin OS=Neisseria gonorrhoeae (strain... [more]
CH60_FRATW2.051e-2441.0660 kDa chaperonin OS=Francisella tularensis subsp.... [more]
CH60_FRATO2.051e-2441.0660 kDa chaperonin OS=Francisella tularensis subsp.... [more]
CH60_FRATM2.051e-2441.0660 kDa chaperonin OS=Francisella tularensis subsp.... [more]
CH60_FRATH2.051e-2441.0660 kDa chaperonin OS=Francisella tularensis subsp.... [more]
CH60_FRATF2.051e-2441.0660 kDa chaperonin OS=Francisella tularensis subsp.... [more]
CH60_DROME2.051e-2444.2360 kDa heat shock protein, mitochondrial OS=Drosop... [more]
CH60_DESHD2.051e-2443.8760 kDa chaperonin OS=Desulfitobacterium hafniense ... [more]
CH60_DECAR2.051e-2443.3160 kDa chaperonin OS=Dechloromonas aromatica (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01M06_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bp
TTAAAGAGAAGAAGTTGAGAGTCGAAGATGCTCTTAATGCAACAAAGGCT
GCAGTTGAGGAAGGTATCGTAGTTGGTGGCGGATGTACTCTACTGAGACT
CTCATCTAAGGTGGATGCCATTAAGGAAACCCTTGATAATGATGAAGAAA
AGGTTGGAGCAGATATTGTTAAAAGAGCTCTGTGCTACCCACTGAAATTA
ATTGCCAAAAATGCCGGTGTTAATGGAAGTGTGGTCAGCGAGAAGGTGCT
TTCAAGTGACAATCATAAATATGGATACAATGCTGCAACTGGAAACTACG
AAGATCTAATGGCTGCAGGAATTATTGATCCTACCAAGGTGGTTAGATGT
TGCTTGGAGCATGCTTCCTCGGTGGCAAAAACCTTCTTGATGTCCGACTG
TGTGGTGGTTGAGATCAAGGAGCCTGAACCCGCTATGCCTGCGGGTAACC
CTATGGACAACTCAGGATATGGATACTAAGCTAATTAACAAGGTCACGGG
AGGCAAGCAAATAAGGTTCTGACTTCGTTATAGCAACTATCTTTCAGTTT
GACAGCGTTGGGTTCTCTTCTTCTTGTAAATTCAATTACTCGACTTAGTA
GAGTTTATGGATTCTGGTGAGGATAGCTTGCCAGAGTACGGCTCGTATTA
ATTTGCAATTAGATGTACAATTGCAATGATTTTGAACTTTTTGAGTGAAA
GAAATTTTATTTTGCTCATCTCCTTCACAGTCTGATACTAATTCTGCGGG
TACTCACATTTGTTACT
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