CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BORPA (60 kDa chaperonin OS=Bordetella parapertussis GN=groL PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 66/157 (42.04%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + +K D ++ G ++ RA+ PL+ I NAG SVV VL+ + YGYNAATG Y DL+ G++DPTKV R L++A+SVA L ++ VVE+ E +PA P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALLRAKQAITGLKG--DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMEDKPAAAPAMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BORBR (60 kDa chaperonin OS=Bordetella bronchiseptica GN=groL PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 66/157 (42.04%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + +K D ++ G ++ RA+ PL+ I NAG SVV VL+ + YGYNAATG Y DL+ G++DPTKV R L++A+SVA L ++ VVE+ E +PA P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALLRAKQAITGLKG--DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMEDKPAAAPAMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH603_RHILO (60 kDa chaperonin 3 OS=Rhizobium loti GN=groL3 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 64/157 (40.76%), Postives = 90/157 (57.32%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DALNAT+AA LLR S ++A+ N ++ G IV+RAL P + IA NAG S+V+ K+L + +G+NA TG Y D++A GI+DP KVVR L+ A+SVA + ++ ++ E + E A G P G G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVPGGGVALLRASLSINAVGA---NSDQTAGISIVRRALQAPARQIAANAGAEASIVAGKILENKGATFGFNAQTGEYGDMIAMGIVDPVKVVRTALQDAASVAGLLVTTEAMIAEAPKKESAGGGGMPGGMGGGG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_PROM3 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 67/159 (42.14%), Postives = 94/159 (59.12%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA----GNPMDNSG 467 K +KLR+EDALNAT+AA TLLRLS + + E N +++ G +IV+RAL P + IA NAG NG VV ++ + G+NA + YEDL+ AGI+D TKVVR L+ A S+A + ++ V+ + +PEP PA G+PM G Sbjct: 388 KNRKLRIEDALNATRAAVEEGIVAGGGTTLLRLSKGLRKLAEQQLNGDQRTGVEIVQRALSAPARQIAINAGENGDVVISEMQRLNK---GFNAISSTYEDLLGAGILDATKVVRLALQDAVSIASMMVTTELVIAD--KPEPPAPAGDGGGDPMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROM9 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.051e-24 Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAGNPMDNSG 467 K KKLR+ED+LNATKAA TL+ +S ++ + + +D+ + G +IVK AL P K IAKNAG NG VV ++ + G+NA +G YE+L +GI+DPTKV+R L+ + S+A L ++ + +I EPE P P G+PM G Sbjct: 388 KYKKLRIEDSLNATKAAIEEGVVSGGGQTLIEISDELLNLSQK-SSDDLRTGINIVKEALLEPTKQIAKNAGFNGDVVVAEIKRLNK---GFNANSGKYENLKESGILDPTKVIRLALQDSVSIAAMLLTTEVAIADIPEPEAAAPGGPGGDPMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGN 449 K++KLR+EDA+NATKAA TL+ L+ ++ EE +GA+IV+RAL PL+ IA+NAG NG+++ E+V GY+AA Y ++ AGI+DP KV R L++A+S+A L ++C++V+ EP+ PAG+ Sbjct: 388 KDRKLRLEDAINATKAAVEEGIVPGGGTTLVHLAPELSNWAAEHLTGEELIGANIVERALSAPLRRIAENAGQNGAIIVERVKEKP-FDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECIIVDKPEPKENNPAGS 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHILV (60 kDa chaperonin OS=Rhizobium leguminosarum bv. viciae GN=groL PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 65/157 (41.40%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK R++DALNAT+AA L R S+K+ +K ND+++ G +IV+RAL ++ IA+NAG S+V KVL + +GYNA T Y D++A GI+DP KVVR L++A+SVA + ++ ++ E+ P+ PAG P G G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGIALARSSTKI-TVKGA--NDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNFGYNAQTSEYGDMIAMGIVDPLKVVRTALQNAASVASLLITTEAMIAEL--PKKDAPAGMPGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PARL1 (60 kDa chaperonin OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DALNAT+AA LL S V + E DN + + G +I++RAL P++ I +NAGV GS+V +KVL S +G++A Y DL+AAGIIDPTKVVR L+ A+S+A + ++ ++ + + + AG P G G Sbjct: 389 KERKDRVDDALNATRAAVEEGIVPGGGTALLMASKAVGKLVE--DNRDIQAGINIIRRALEAPIRQIVENAGVEGSIVVQKVLESKQANFGFDAQKEEYCDLVAAGIIDPTKVVRTALQDAASIAGLLITTEAMIADAPKKDNGAAAGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIMB (60 kDa chaperonin OS=Neisseria meningitidis serogroup B GN=groL PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PA+P M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NEIM0 (60 kDa chaperonin OS=Neisseria meningitidis serogroup C (strain 053442) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA LLR + ++ + N ++ G IV RA+ PL+ I NAG SVV KVL + YGYNA +G Y D++ G++DP KV R L+HA+S+A L +DC++ EI E +PA+P M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHT--GNADQDAGVQIVLRAVESPLRQIVANAGGEPSVVVNKVLEGKGN-YGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAASIAGLMLTTDCMIAEIPEDKPAVPDMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |