CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LACPL (60 kDa chaperonin OS=Lactobacillus plantarum GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K R+EDALNAT+AA L+ + V A+KET D + G +IVKRAL P++ IA+NAG+ GSV+ EK + G+NAAT + D++ AGI+DPTKV R L++A+SV+ L ++ VV E +PE PA N G G Sbjct: 388 KERKYRIEDALNATRAAVEEGFVAGGGTALINVIKDVAALKETGD---VQTGINIVKRALEEPVRQIAENAGLEGSVIVEK-MKEQKPGVGFNAATDEWVDMIKAGIVDPTKVTRSALQNAASVSALLLTTEAVVAE--KPEENAPAAPAAPNPGMG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FLAPJ (60 kDa chaperonin OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 67/140 (47.86%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 422 KEKK RV+DAL+AT+AA LLR + + IK DN +E G IV RA+ PL+ I +NAG+ GSVV KV +GYNA T Y D++ AGIIDP KV R LE+A+SVA L ++C +VEIKE Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALLRAKNVLKDIKA--DNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGSGD-FGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVEIKE 526
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_COPPD (60 kDa chaperonin OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 69/150 (46.00%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 452 KEKK RVEDA++ATKAA TL++ S+ +D K L+NDE +GA IVK+AL P ++IA+NAG G VV E+ L + G++A G Y D+ AGIIDPTKV R L++A+S+A L ++ +VVE E E A P P Sbjct: 389 KEKKHRVEDAVSATKAAMEEGIVAGGGVTLVKASTVLD--KLPLENDE-LIGATIVKKALMEPARVIAENAGFAGEVVVEE-LKKREYPVGFDAVKGEYVDMFEAGIIDPTKVTRSALQNAASIAAMVLTTEALVVEKPEQEKAQPGMPP 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R ++ + DN+++K+G +IV+RAL PL+ I N G +G+VV EKV + +G+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + +IK+ + MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVVGGGVALIRAIKGLNNAQA--DNEDQKIGIEIVRRALEEPLRQIVANTGTQDGAVVLEKVKEGEGD-FGFNARTETYENLVEAGVVDPTKVTRSALENAASVAGILLTTEAAITDIKDDKMDMPAMPPGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BRANA (Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 EKK RV DALNATKAA LL S ++D + N + K+G I++ AL P+ IA NAGV G+V+ K+L SDN GY+AA G Y D++ +GIIDP KV+R L A+SV+ ++ VV EI E A PA Sbjct: 425 EKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTA--NFDHKIGVQIIQNALKTPVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALVDAASVSSLLTTTEAVVTEIPTKEDASPA 568
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BORPE (60 kDa chaperonin OS=Bordetella pertussis GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 66/157 (42.04%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + +K D ++ G ++ RA+ PL+ I NAG SVV VL+ + YGYNAATG Y DL+ G++DPTKV R L++A+SVA L ++ VVE+ E +PA P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALLRAKQAITGLKG--DTADQNAGIKLILRAVEEPLRTIVTNAGDEASVVVNTVLNGKGN-YGYNAATGEYGDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELMENKPAAAPAMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACIBY (60 kDa chaperonin OS=Acinetobacter baumannii (strain AYE) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R + ++ +K N+++ G +I++RA+ PL+ I NAG SVV V + + + +GYNAATG Y D++ GI+DP KV R LEHA+SVA L ++C++ +I E +PA P M G Sbjct: 390 KEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGA--NEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGN-FGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACIBT (60 kDa chaperonin OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=groL PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R + ++ +K N+++ G +I++RA+ PL+ I NAG SVV V + + + +GYNAATG Y D++ GI+DP KV R LEHA+SVA L ++C++ +I E +PA P M G Sbjct: 390 KEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGA--NEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGN-FGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACIBC (60 kDa chaperonin OS=Acinetobacter baumannii (strain ACICU) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R + ++ +K N+++ G +I++RA+ PL+ I NAG SVV V + + + +GYNAATG Y D++ GI+DP KV R LEHA+SVA L ++C++ +I E +PA P M G Sbjct: 390 KEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGA--NEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGN-FGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACIB5 (60 kDa chaperonin OS=Acinetobacter baumannii (strain AB0057) GN=groL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24 Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R + ++ +K N+++ G +I++RA+ PL+ I NAG SVV V + + + +GYNAATG Y D++ GI+DP KV R LEHA+SVA L ++C++ +I E +PA P M G Sbjct: 390 KEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGA--NEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGN-FGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAPDMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |