CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURS3 (60 kDa chaperonin 2 OS=Burkholderia sp. (strain 383) GN=groL2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.499e-24 Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + A+ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAAL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGTGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHOCA (60 kDa chaperonin OS=Rhodobacter capsulatus GN=groL PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 63/148 (42.57%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE+K RV+DALNAT+AA L++ + K++ + T N ++ G IV+RAL PL+ IA+NAGV+G+VV+ KV S + +G+NA T Y D+ G+IDP KV R LE A+S+A + ++C++ E EP+ A PAG Sbjct: 390 KERKDRVDDALNATRAAVQEGIIVGGGVALVQAAKKLNDL--TGANSDQDAGISIVRRALEAPLRQIAENAGVDGAVVAGKVRESADPAFGFNAQTEEYGDMFGFGVIDPAKVTRTALEDAASIAGLLITTECMIAEKPEPK-AAPAG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RHILW (60 kDa chaperonin OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 64/151 (42.38%), Postives = 94/151 (62.25%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA---MPAG 446 KEKK R++DALNAT+AA LLR S+K+ +K ND+++ G +IV+RAL ++ IA+NAG S+V KVL + YGYNA T + D++A GI+DP KVVR L++A+SVA + ++ ++ E+ + E A MP G Sbjct: 390 KEKKDRIDDALNATRAAVQEGIVPGGGIALLRSSTKI-TVKGA--NDDQEAGINIVRRALQSLVRQIAENAGDEASIVVGKVLDKNEDNYGYNAQTSEFGDMIAMGIVDPLKVVRTALQNAASVASLLITTEAMIAELPKKESAGGGMPGG 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HERAR (60 kDa chaperonin OS=Herminiimonas arsenicoxydans GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 62/144 (43.06%), Postives = 88/144 (61.11%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 434 KEKK RVEDAL+AT+AA LLR + ++ DN +++ G IV RA+ PL++I +NAG SVV KVL + +GYNAA G Y D++ G++DP KV R L++A+S+A L +DC+V E+ E +PA Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALLRARANINVKG---DNSDQEAGIRIVLRAMEEPLRMIVQNAGEEASVVVAKVLEGKGN-FGYNAANGIYGDMVEMGVLDPAKVTRSALQNAASIAALLLTTDCMVAEVAEEKPA 529
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HELHP (60 kDa chaperonin OS=Helicobacter hepaticus GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 70/157 (44.59%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA L+R S KV K L+ DE +G DI+KRA+ PL IA NAG + VV +V + +G+NA TG Y D+ GIIDP KV R L++A SV+ L ++ + EIKE P PAMP M G Sbjct: 390 KEKKDRVDDALSATKAAVDEGIVIGGGSALIRASQKV---KLKLEGDEA-IGYDIIKRAIKAPLAQIATNAGYDAGVVVNEVEKNSKDGFGFNATTGEYVDMFKEGIIDPLKVTRVALQNAVSVSSLLLTTEATINEIKEDKPAPAMPDMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOAB (60 kDa chaperonin OS=Clostridium acetobutylicum GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 62/151 (41.06%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNP 452 KE+K+R+EDAL ATKAA + + +V + T D + +VG +I+ +AL P++ IA NAG+ GSV+ EK+++S+ G++A Y D+++ GI+DPTKV R L++A+SVA TFL ++C V +I E + P MP G P Sbjct: 388 KERKMRIEDALAATKAAVEEGIIAGGGTAYINVLPEVREL--TSDEPDVQVGINIIVKALEEPVRQIAANAGLEGSVIIEKIINSEKG-IGFDALHEKYVDMLSVGIVDPTKVTRSALQNAASVASTFLTTECAVADIPEKDKPEMPGGAP 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + A+ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAAL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ANOFW (60 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 67/149 (44.97%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMP 440 KE+KLR+EDALNAT+AA L+ + SKV AI+ D E G IV RA+ P++ IA+NAG+ GSV+ E+ L ++ G+NAATG + D++ AGI+DPTKV R L++A+SVA FL ++ VV + E P MP Sbjct: 388 KERKLRIEDALNATRAAVEEGIVAGGGTALMNVYSKVAAIEAEGD---EATGVKIVLRAIEEPVRQIAQNAGLEGSVIVER-LKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEENKNTPGMP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ACIBS (60 kDa chaperonin OS=Acinetobacter baumannii (strain SDF) GN=groL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 440 KEKK RV+DAL+AT+AA L+R + ++ +K N+++ G +I++RA+ PL+ I NAG SVV V + + + +GYNAATG Y D++ GI+DP KV R LEHA+SVA L ++C++ +I E +PA P Sbjct: 390 KEKKDRVDDALHATRAAVEEGVVAGGGVALVRAVNALEGLKGA--NEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGN-FGYNAATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAP 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_ROSCS (60 kDa chaperonin 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=groL2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.570e-24 Identity = 68/156 (43.59%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLS----SDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE------PAMP 440 KE+K RVEDALNAT+AA LL S +D ++ + EE++ ++++RAL PL+ +A NAG +GSVV +V + +N YG++ TGNY DLM AGIIDP KVVR LE+A SVA L +D ++ E EP+ P+MP Sbjct: 389 KERKARVEDALNATRAAVEEGIVPGGGVALLNAISALDNVQTQFE--EERMALNVLRRALEEPLRQLAINAGEDGSVVVNQVRTLQREHNNPHYGFDVMTGNYVDLMQAGIIDPAKVVRSALENAVSVAGIVLTTDALITEAPEPKKNGARTPSMP 542 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |