CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLPB (60 kDa chaperonin OS=Chlorobium phaeobacteroides (strain BS1) GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 65/158 (41.14%), Postives = 94/158 (59.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + +D ++ +N+++K G +IV+RAL PL+ I N G +G+VV E+V + +G+NA T YE + AG++DPTKV R LE+A+SVA L ++ + +IKE MPA P G G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVAGGGVALIRAAKGLDNVQP--ENEDQKTGVEIVRRALEEPLRQIVANTGTTDGAVVVERVKQGEGD-FGFNARTEEYEKMTEAGVVDPTKVTRTALENAASVAGILLTTEAAITDIKEEGGDMPAMPPGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMC1 (60 kDa chaperonin OS=Campylobacter concisus (strain 13826) GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+ S V+ L DE +GA+IV+RAL PL+ IA+NAG + VV+ V +S + +G+NAATG Y ++ AGIIDP KV R L++A SVA L ++ + EIKE E AMPA M G Sbjct: 389 KEKKDRVDDALSATRAAVEEGIVVGGGSALILASKSVNL---NLQGDEA-IGAEIVRRALRAPLRQIAENAGFDAGVVANAVETSKDANFGFNAATGEYVNMFEAGIIDPVKVERVALQNAVSVASLLLTTEATISEIKE-EKAMPAMPDMGGMG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BARHE (60 kDa chaperonin OS=Bartonella henselae GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAG 446 KEKK RV+DALNAT+AA LLR ++ A+ N +++ G +IV+RAL P + IA NAG +++ KVL ++ +GYN ATG + DL+A GI+DP KVVR L++A+S+A + ++ +V E+ + P P MP G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVAGGGTALLRAAN---ALTVKGSNPDQEAGINIVRRALQAPARQIATNAGEEAAIIVGKVLENNADTFGYNTATGEFGDLIALGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKDTPVPPMPGG 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_ALHEH (60 kDa chaperonin OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 63/157 (40.13%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA LLR + +D ++ N +++VG +IV+RA+ PL+ I NAG +G+VV +V + + + YGYNA +G Y DL+ GI+DPTKV R L++A+SVA + ++ +V ++ + + A G D G G Sbjct: 391 KEKKARVEDALHATRAAVEEGIVPGGGTALLRAQASLDGLEYA--NHDQEVGINIVRRAMEEPLRQIVYNAGGDGAVVVNEVRNGEGN-YGYNAQSGEYGDLVEMGILDPTKVTRTALQNAASVAALMITTEVMVADLPKDDDAGAGGGMGDMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+AT+AA L+R +D +K L+ DE GA IV RA+ PL+ +A NAG G+++ V N GYN AT YEDL++AG++DPTKV R L++A+S+A L ++CV+ + E + D G G Sbjct: 389 KEKKARVDDALHATRAAVEEGIVPGGGVALIRAQKAIDTLK--LEGDEA-TGAQIVYRAVEAPLRQLACNAGREGALIVANVKGMKNTAEGYNVATDKYEDLLSAGVVDPTKVTRSALQNAASIAGLLLTTECVIADKPEKKSCSCGSGASDMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SINMW (60 kDa chaperonin 2 OS=Sinorhizobium medicae (strain WSM419) GN=groL2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 61/154 (39.61%), Postives = 95/154 (61.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 458 KEKK RV+DAL+AT+AA LLR+ S ++ + ND+++VG +IV+RA+ P++ IA+NAG GS++ K+ ++ +G+NA TG + DL G+IDP KVVR L+ A+SVA + ++ ++ E K+ +P MP MD Sbjct: 390 KEKKDRVDDALHATRAAVEEGILPGGGVALLRVVSVLNGLATA--NDDQRVGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKEDFAFGWNAQTGEFGDLFQMGVIDPAKVVRAALQDAASVAGLLVTTEAMIAEKPKKDGQPQMPPAPGMD 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURCM (60 kDa chaperonin 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.968e-24 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIASL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGQGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA-GNPMDNSGY 470 EKK RV DALNATKAA LL S ++D + N ++K+G I++ AL P+ IA NAGV G+VV K+L D+ GY+AA G Y D++ AGIIDP KV+R L A+SV+ ++ VVVE+ + E +PA G M Y Sbjct: 422 EKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTA--NFDQKIGVQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAASVSSLMTTTEVVVVELPKDENEVPAMGGGMGGMDY 575
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_PHOPR (60 kDa chaperonin OS=Photobacterium profundum GN=groL PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 67/157 (42.68%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DAL+AT+AA L+R +SKV A DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + + YGYNAATG Y D++A GI+DPTKV R L+ A+SVA + ++ ++ ++ PA A D G G Sbjct: 390 KEKKDRVQDALHATRAAVEEGVVAGGGVALIRAASKVAASGLEGDNEEQNVGIRVALRAMESPLRQIVKNAGDEDSVVANNVRAGEGN-YGYNAATGVYGDMIAMGILDPTKVTRSALQFAASVAGLMITTEAMITDM----PAKDASAMPDMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HUMAN (60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.795e-24 Identity = 65/148 (43.92%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI--KEPEPAMPA 443 EKK RV DALNAT+AA C LLR +D++ T N+++K+G +I+KR L P IAKNAGV GS++ EK++ S + + GY+A G++ +++ GIIDPTKVVR L A+ VA ++ VV EI +E +P M A Sbjct: 416 EKKDRVTDALNATRAAVEEGIVLGGGCALLRCIPALDSL--TPANEDQKIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSS-EVGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPGMGA 560 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |