CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BURMA (60 kDa chaperonin OS=Burkholderia mallei GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BURM9 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10229) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BURM7 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10247) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BURCE (60 kDa chaperonin OS=Burkholderia cepacia GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ +GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACCR (60 kDa chaperonin OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ +GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACC4 (60 kDa chaperonin OS=Bacillus cereus (strain B4264) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ +GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACC2 (60 kDa chaperonin OS=Bacillus cereus (strain G9842) GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 67/158 (42.41%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ +GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AMOPS (60 kDa chaperonin OS=Amoeba proteus symbiotic bacterium GN=groL PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R +D +K DN ++ +G +I++RA+ PL+ I NAG SV+ KV ++ +G+NAATG Y D++ GI+DPTKV R L++A+SV L ++C+V ++ + + M M G Sbjct: 389 KEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKVLDGLKG--DNADQDMGINILRRAIESPLRQIVANAGYESSVIVNKVAEHKDN-FGFNAATGQYGDMVEMGILDPTKVTRTALQNAASVRSLMLTTECMVADLPKKDEGMAGAGDMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_VIBVY (60 kDa chaperonin 1 OS=Vibrio vulnificus (strain YJ016) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SVA + ++ +V ++ + + MP M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKIVDLQG--DNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEG-SYGYNAATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMPDMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |