CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_VIBVU (60 kDa chaperonin 1 OS=Vibrio vulnificus GN=groL1 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R +SK+ ++ DN+E+ VG + RA+ PL+ I KNAG SVV+ V + + YGYNAATG Y D++ GI+DPTKV R L+ A+SVA + ++ +V ++ + + MP M G Sbjct: 390 KEKKDRVEDALHATRAAVEEGIVAGGGVALIRAASKIVDLQG--DNEEQNVGIRVALRAMEAPLRQITKNAGDEESVVANNVRAGEG-SYGYNAATGVYGDMLEMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPQKDSGMPDMGGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_PROM1 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL1A) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEP--EPAMPAGNPMDNSG 467 K +KLR+EDALNAT+AA TLL LS + + + L+ D+ K G +I+KRAL P K IA NAG NG VV + G+NA TG Y DL+ AGI+D +KV+R L+ A S+A + ++ V+ + EP P G+PM G Sbjct: 388 KNRKLRIEDALNATRAAIEEGIVAGGGTTLLELSEGLGDLAKKLEGDQ-KTGVEIIKRALTAPTKQIAINAGFNGDVVVSDIKRLGK---GFNAQTGEYVDLLEAGILDASKVIRLALQDAVSIASLLITTEVVIADKPEPPSAPGAEGGDPMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 67/156 (42.95%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE----PAMPAGNPMD 458 KEKK RV+DA +AT AA L+R ++A L N++E++GA IV +AL PLK IA NAG G+++ ++VLS + + GY+A Y D++ AGI+DPTKV RC LE A+SVA L ++ ++ +I E + PAMP G MD Sbjct: 390 KEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSE-GYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEALIADIPEEKSSSAPAMP-GAGMD 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURVG (60 kDa chaperonin 1 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 89/157 (56.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + ++ T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASL--TGVNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURCH (60 kDa chaperonin 1 OS=Burkholderia cenocepacia (strain HI2424) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH601_BURCA (60 kDa chaperonin 1 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.018e-23 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R + + + T N ++ G IV RA+ PL+ I N G SVV V + + YGYNAATG Y D++ AG++DPTKV R L++A+SVA L +D V E+ + + MP G P G G Sbjct: 390 KEKKARVEDALHATRAAVEEGIVAGGGVALIRARTAIAGL--TGANADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGN-YGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPKEDAPMPGGMPGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_UNCTG (60 kDa chaperonin OS=Uncultured termite group 1 bacterium phylotype Rs-D17 GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 59/151 (39.07%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 K KK +VEDALNAT+A LL+ + ++ I + +EK G +IV +AL P+++I +NAG+ SVV +KV +S + +GY+A Y D++ AGI+DP KV R LE+A+S+A L ++ +V +I E P P G M Sbjct: 388 KTKKFKVEDALNATRAGVEEGIVAGGGVALLKTQTVLEKINAA--DSDEKTGIEIVLKALEGPIRMIIENAGLEASVVVDKVKNSKDTAFGYDADNNEYVDMIKAGIVDPAKVTRTALENAASIASLILTTETLVTDIPEKSPKFPGGGGM 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_SHEPA (60 kDa chaperonin OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R++SK+ + + N+++K G I RA+ PL+ IA NAG GSVV+ V + + YGYNA Y D++ GI+DPTKV R L+ ASS+A + ++C+V E+KE M M G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALVRVASKIGELD--VINEDQKHGVIIALRAMEAPLRQIAANAGEEGSVVANNVKNGTGN-YGYNAGNDTYGDMLEMGILDPTKVTRSALQFASSIAGLMITTECMVAEVKEDAADMGGMGGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |