CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LEGMI (60 kDa chaperonin OS=Legionella micdadei GN=groL PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 61/156 (39.10%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 6 EKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 ++K RVEDAL+AT+AA L+R +D +K +N ++ +G +I++RA+ PL+ I NAG SV+ KV S ++ +G+NAATG Y D++ GI+DPTKV R L++A+SVA L ++C+V ++ + E M AG G G Sbjct: 388 KRKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDGLKG--ENADQDMGINILRRAIESPLRQIVANAGYEPSVIVNKVAESKDN-FGFNAATGEYGDMVEMGILDPTKVTRTALQNAASVASLMLTTECMVADLPKKEEPMGAGEMGGMGGMG 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 61/147 (41.50%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 443 KEKK RVEDAL+AT+AA +R + +D++ E++ G I+K +L P++ IA NAG++ S+V +KV + +GYNAA Y D++ AGIIDPTKV RC L++ASSVA L ++C++ E + + MPA Sbjct: 390 KEKKARVEDALHATRAAVDEGIVPGGGVAYIRALNALDSVVLPA---EQQFGVTIIKSSLEAPIRQIADNAGIDASIVVDKV-KNGKEAFGYNAADDTYVDMLEAGIIDPTKVSRCALQNASSVAGLMLTTECMIAEKPKKDSGMPA 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FLAJ1 (60 kDa chaperonin OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/153 (43.79%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEP--AMPAGNPM 455 KEKK RV+DAL+AT+AA LLR + +K DN +E G IV RA+ PL+ I +NAG+ GSVV KV +GYNA T Y D++ AGIIDP KV R LE+A+SV+ L ++C +++IKE MP G M Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVAGGGVALLRAKLALADLKA--DNADEATGIQIVSRAIEAPLRTIVENAGLEGSVVVAKVAEGSGD-FGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVSGMILTTECALIDIKEENAGGGMPMGGGM 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DEIRA (60 kDa chaperonin OS=Deinococcus radiodurans GN=groL PE=1 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 70/159 (44.03%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNY-EDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE-PEPAMPAGNPMDNSGYG 473 KEKK R EDAL+ ++A TLLR+ V E+L DE GA I+ RAL P + IA NAG GSV+ V+ SD +YG+NAATG Y ED++AAGI+DP KV R L++A+S+ L ++ +V + E PAMP G D G G Sbjct: 388 KEKKHRYEDALSTARSAVEEGIVAGGGTTLLRVIPAVRKAAESLTGDEA-TGARILIRALEEPARQIAANAGEEGSVIVNAVVGSDKARYGFNAATGEYVEDMVAAGIVDPAKVTRTALQNAASIGALILTTEAIVSDKPEKAAPAMPQGGG-DMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOB6 (60 kDa chaperonin OS=Clostridium botulinum (strain 657 / Type Ba4) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMD 458 KE+KLR+EDAL ATKAA + + K+ + T D + K+G DI+++AL P++ IA NAGV GSV+ EKV +S+ GY+A Y D++ GI+DPTKV R L++A+S+A TFL ++ V +I E E P M G MD Sbjct: 388 KEEKLRIEDALAATKAAVEEGIVPGGGTAYIDIIPKIADL--TSDIIDVKLGIDIIRKALEEPVRQIANNAGVEGSVIIEKVKASEAG-VGYDALNDKYVDMLKTGIVDPTKVTRSALQNAASIASTFLTTEAAVADIPEKENTPPMAPGMGMD 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLFF (60 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 66/156 (42.31%), Postives = 96/156 (61.54%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE----PAMPAGNPMD 458 KEKK RV+DA +AT AA L+R ++A L N++E++GA IV +AL PLK IA NAG G+++ ++VL+ +++ GY+A Y D++ AGI+DPTKV RC LE A+SVA L ++ ++ +I E + PAMP G MD Sbjct: 390 KEKKDRVDDAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLARSSNE-GYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEALIADIPEDKSSSAPAMP-GAGMD 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BLOFL (60 kDa chaperonin OS=Blochmannia floridanus GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 62/158 (39.24%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R+++ + + DN+++ VG + +RA+ PL+ I NAG SV++ V S + + GYNAAT Y +++ GI+DPTKV R L++A+S+A + ++C+V E+ KE +P + GNP G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALIRVANAIRNLCG--DNEDQNVGIKVARRAMEAPLRQIMANAGEEPSVIANNVRSGEGNT-GYNAATEKYGNMIELGILDPTKVTRSALQYAASIAGLMITTECMVTELPKEDKPDLGGGNPGGAGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACHK (60 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACCZ (60 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACCQ (60 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groL PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA +L+ + +KV +I + +E G +IV RAL P++ IA NAG+ GSVV E+ L + G+NAATG + +++ GI+DP KV R L++A+SVA FL ++ VV + EP PAMP M G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTSLMNVYTKVASI---VAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVER-LKGEKVGVGFNAATGEWVNMLETGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPDMGGMGMGGMG 541 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |