CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RUTMC (60 kDa chaperonin OS=Ruthia magnifica subsp. Calyptogena magnifica GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 60/155 (38.71%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+ +D + T DN ++ +G DI KRA+ PL+ I N G SV+ +V ++ YGYNAAT Y D++ GI+DPTKVVR L+HA+S++ + ++ ++ + + PA A M G Sbjct: 390 KEKKGRVDDALHATRAAVEEGVVPGGGVALVRVIKALDGL--TGDNHDQNIGIDIAKRAMEAPLRQIVTNGGGEASVILNEVAKGKDN-YGYNAATEKYGDMLKMGILDPTKVVRAALQHAASISGLMITTEAMITDTPQDTPATAAAPDMGGMG 541
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 63/148 (42.57%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KE+KLR+EDALN+T+AA L+ + +KV A++ T D G IV +AL P++ IA+NAG+ GSV+ EK+ ++ GYNAAT + +++ AGI+DPTKV R L++A+SVA FL ++ VV E+ E P G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAAVEATGD---VATGVKIVLKALEAPIRQIAENAGLEGSVIVEKIKHAETG-VGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAVVAEMPEENPTPDMG 531
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_GEOSW (60 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 66/150 (44.00%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV----EIKEPEPAMP 440 KE+KLR+EDALN+T+AA L+ + +KV AI+ D E G IV RA+ P++ IA+NAG+ GSV+ E+ L ++ G+NAATG + D++ AGI+DPTKV R L++A+SVA FL ++ VV E K P MP Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYNKVAAIEAEGD---EATGVKIVLRAIEEPVRQIAQNAGLEGSVIVER-LKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEENKGGNPGMP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 60/157 (38.22%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+K RV+DALNAT+AA L++ + +D ++ N+++ +G +IV++AL PL+ IA+NAGV+GSVV+ K+ S + +G+NA T Y D+ G+IDP KVVR L+ A+S+A + ++ +V + E A G D G G Sbjct: 390 KERKDRVDDALNATRAAVQEGIVVGGGVALIQAAKHLDGLEGA--NNDQNIGINIVRKALEAPLRQIAENAGVDGSVVAGKIRESSDLAFGFNAQTEEYGDMFKFGVIDPAKVVRTALQDAASIAGLLITTEAMVADKPAKEGAGAGGGMPDMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CARHZ (60 kDa chaperonin OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 66/152 (43.42%), Postives = 92/152 (60.53%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMD 458 KEKKLR+EDALNAT+AA T + + ++ +++T DE + G IV++AL PLK IA NAG+ GSV+ EKV + +G+NA T Y D++AAGI+DP KV R L++A+SVA L ++ +V E E E P MD Sbjct: 389 KEKKLRIEDALNATRAAVEEGIVAGGGTTYIHIIKALEELEKTATGDE-RTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVG-HGFNALTEEYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEALVAEKPEKEKKGPDMPNMD 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AERSA (60 kDa chaperonin OS=Aeromonas salmonicida GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+++K+ ++ DN+++ VG + RA+ PL+ I NAG SV++ V + + + +GYNA T Y D++A GI+DPTKV R L+ ASS+A + ++C++ E+ K+ PAMP M G Sbjct: 390 KEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGLRG--DNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGN-FGYNAYTEQYGDMLAMGILDPTKVTRSALQFASSIAGLMITTECMITELPKKDTPAMPDMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_AERS4 (60 kDa chaperonin OS=Aeromonas salmonicida (strain A449) GN=groL PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 61/156 (39.10%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+++K+ ++ DN+++ VG + RA+ PL+ I NAG SV++ V + + + +GYNA T Y D++A GI+DPTKV R L+ ASS+A + ++C++ E+ K+ PAMP M G Sbjct: 390 KEKKARVDDALHATRAAVEEGVVAGGGVALVRVAAKLAGLRG--DNEDQNVGIKVALRAMEAPLRQIVINAGEEASVIANAVKNGEGN-FGYNAYTEQYGDMLAMGILDPTKVTRSALQFASSIAGLMITTECMITELPKKDTPAMPDMGGMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURTA (60 kDa chaperonin 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 67/151 (44.37%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNP 452 KEKK RV+DAL+AT+AA L+R+ + + T N ++K G +IV RAL PL+ I NAG SVV V + + YGYNAATG Y DL+ +G++DPTKV R L++A+S+A L +D V E K+ PA PAG P Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAEL--TGANVDQKAGINIVLRALEEPLRQIVANAGEEASVVVATVAAGSGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPAQPAGVP 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+ + A+ N ++K G IV RAL PL+ I NAG SVV V + + YGYNAATG Y DL+ +G++DPTKV R L++A+S+A L +D V E K+ P PAG P +G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGA--NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPTAPAGVPGAGAG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+AT+AA L+R+ + A+ N ++K G IV RAL PL+ I NAG SVV V + + YGYNAATG Y DL+ +G++DPTKV R L++A+S+A L +D V E K+ P PAG P +G Sbjct: 390 KEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAGA--NADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGN-YGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPKDAPPTAPAGVPGAGAG 542 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |