CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RICTY (60 kDa chaperonin OS=Rickettsia typhi GN=groL PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 66/156 (42.31%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV-EIKEPEPAMPAGNPMDNSG 467 KE+K RVEDAL AT+AA TLL S + +K ++N +++ G +IV AL PLK I KNAG NG VV K+L ++ YG+NA Y D++ AGIIDP KVVR L+ A+SVA + ++ ++V E + E MP M G Sbjct: 390 KERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLK--VENKDQQAGIEIVIEALKDPLKQIVKNAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEEPMPMRGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_RICPR (60 kDa chaperonin OS=Rickettsia prowazekii GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 66/156 (42.31%), Postives = 90/156 (57.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV-EIKEPEPAMPAGNPMDNSG 467 KE+K RVEDAL AT+AA TLL S + +K ++N +++ G +IV AL PLK I KNAG NG VV K+L ++ YG+NA Y D++ AGIIDP KVVR L+ A+SVA + ++ ++V E + E MP M G Sbjct: 390 KERKDRVEDALAATRAAVEEGVVAGGGVTLLHASQTLTKLK--VENKDQQAGIEIVIEALKDPLKQIVKNAGENGGVVVGKLLEHNDKNYGFNAQDMQYVDMIKAGIIDPAKVVRTALQDAASVASLIITTETLIVDEPSDKEEPMPMRGGMGGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_NITEC (60 kDa chaperonin OS=Nitrosomonas eutropha (strain C91) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 69/149 (46.31%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEI-KEPEPAMPAG 446 KEKK RVEDA +AT+AA LLR V K DN ++ G IV RAL PL+ I N G SVV KV + +GYNAATG Y DL+A G++DPTKV R L++ASSVA L +D +V E+ KE P AG Sbjct: 390 KEKKARVEDAFHATRAAVEEGIVPGGGVALLRTIDAVSKAKG--DNHDQDSGIKIVLRALEEPLRQIVTNCGDEASVVVNKVKEGKGN-FGYNAATGEYGDLVAMGVLDPTKVTRSALQNASSVAGLILTTDAMVAELPKEDSPGAGAG 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_MARMM (60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RV+DALNAT+AA LL+ S+K+ ++ DN ++ G IV RAL P++ IA N+GV GS+V KV+ + + +G+NA T Y D++A G+IDP KVVR L+ A+SVA + ++ V + + E A G D G G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVPGGGVALLKASAKLAGLEG--DNADQTQGIAIVARALQSPIRQIATNSGVEGSIVVGKVMENPSATFGFNAQTEEYGDMLAFGVIDPAKVVRTALQDAASVASLLITTEAAVADAPKEEGA--GGGMPDMGGMG 542
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HAEPS (60 kDa chaperonin OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 63/145 (43.45%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKV-DAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 434 KEKK RV+DAL+AT+AA L+R +SKV D +K DN+E+ VG + RA+ PL+ I NAG SVV+ V N YGYNAAT Y D++ GI+DPTKV R L+ A+S+A + ++C+V ++ + E A Sbjct: 390 KEKKDRVDDALHATRAAVEEGIIAGGGVALVRAASKVADVVKG--DNEEQNVGIRLALRAMEAPLRQIVTNAGEEASVVARNV-KDGNGNYGYNAATEQYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMVTDLPKEEKA 531
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_FERNB (60 kDa chaperonin OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 64/151 (42.38%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPM 455 KEKK R+EDAL+AT+AA TLLR ++ + L DE K+GA IV AL P++ IA NAG +G+++ VLS D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ +VVE +PE PA M Sbjct: 388 KEKKHRIEDALSATRAAVEEGIVPGGGITLLRARKVLEPVLNELTGDE-KLGAQIVYNALEAPIRQIALNAGYDGAIIIHNVLSKDDVAYGFDALKGEYCNMYERGIIDPAKVTRSALQNAASIAGMLLTTEVLVVE--KPEEKKPAAPEM 535
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_EDWI9 (60 kDa chaperonin OS=Edwardsiella ictaluri (strain 93-146) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 61/144 (42.36%), Postives = 90/144 (62.50%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 434 KEKK RVEDAL+AT+AA L+R+++K+ +K N+E+ VG + RA+ PL+ I NAG SVV+ V + + + YGYNAAT Y D++ GI+DPTKV R L++ASSVA + ++C+V ++ + E A Sbjct: 390 KEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAKLVDLKGI--NEEQNVGIKVALRAMESPLRQIVANAGEEPSVVTNNVKAGEGN-YGYNAATEQYGDMIEMGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKEEKA 530
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 66/158 (41.77%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAG-VNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE--PAMPAGNPMDNSG 467 KEKK RVEDAL+AT+AA L+R + ++ ++ ++N+++K G +I++RAL PL+ I N G V+GSVV KV + +G+NA T +E+++AAG+IDPT V R LE+A+SVA L ++ V+ E E E P MP G M G Sbjct: 390 KEKKARVEDALHATRAAVQEGIVAGGGVALIRAVTGLENVQ--VENEDQKTGLEIIRRALEEPLRQIVANTGTVDGSVVVMKVKEGKDD-FGFNARTETFENMIAAGVIDPTMVTRTALENAASVAGLLLTTEAVISEKPEDEKMPPMPPGGGMGGMG 544
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMJD (60 kDa chaperonin OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 67/155 (43.23%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA L++ +K IK L DE +GA IV+RAL PL+ IA+NAG + VV V ++ + G++AA G Y +++ +GIIDP KV R L +A SVA L ++ + EIKE +PAMP + M G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAK---IKLDLQGDEA-IGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPAMPDMSGMGGMG 539
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CAMJ8 (60 kDa chaperonin OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=groL PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23 Identity = 67/155 (43.23%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 467 KEKK RV+DAL+ATKAA L++ +K IK L DE +GA IV+RAL PL+ IA+NAG + VV V ++ + G++AA G Y +++ +GIIDP KV R L +A SVA L ++ + EIKE +PAMP + M G Sbjct: 389 KEKKDRVDDALSATKAAVEEGIVIGGGAALIKAKAK---IKLDLQGDEA-IGAAIVERALRAPLRQIAENAGFDAGVVVNSVENAKDENTGFDAAKGEYVNMLESGIIDPVKVERVALLNAVSVASMLLTTEATISEIKEDKPAMPDMSGMGGMG 539 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |