CF835719
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LEPBP (60 kDa chaperonin OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KEKK RVEDAL+AT+AA TLLR V A+K D E+ GA+I+ RAL P+++I NAG+ GSV+ E+ + ++ G+NA T +EDL+ AG++DP KVVR L++A+S+ L ++ + + EP+ A AG Sbjct: 389 KEKKARVEDALSATRAAVEEGIVPGGGLTLLRAQDAVKALKLVGD---EQTGANIILRALEEPIRMITSNAGLEGSVIVEQARARKGNE-GFNALTMVWEDLIKAGVVDPAKVVRSALQNAASIGAMILTTEVTITDKPEPKDASGAG 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_LEPBA (60 kDa chaperonin OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 62/148 (41.89%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 446 KEKK RVEDAL+AT+AA TLLR V A+K D E+ GA+I+ RAL P+++I NAG+ GSV+ E+ + ++ G+NA T +EDL+ AG++DP KVVR L++A+S+ L ++ + + EP+ A AG Sbjct: 389 KEKKARVEDALSATRAAVEEGIVPGGGLTLLRAQDAVKALKLVGD---EQTGANIILRALEEPIRMITSNAGLEGSVIVEQARARKGNE-GFNALTMVWEDLIKAGVVDPAKVVRSALQNAASIGAMILTTEVTITDKPEPKDASGAG 532
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_HELMI (60 kDa chaperonin OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 68/150 (45.33%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAG 446 K+KKLR+EDALNAT+AA L+ + +D + ET DE G I++RAL PL+ IA NAG GSVV EKV S + G+NAAT YED++AAGI+DP KV R L++A+S+A L ++ +V + K+ PAM G Sbjct: 388 KDKKLRIEDALNATRAAVEEGIVPGGGTALVSIQKALDNV-ETPAGDEA-TGVAIIRRALEEPLRQIANNAGYEGSVVVEKVKSLPVGQ-GFNAATEVYEDMIAAGIVDPAKVTRSALQNAASIAAMLLTTEAIVADKPEKKDAPAMSPG 534
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_CLOCE (60 kDa chaperonin OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE-PAMPAGNP 452 KEKKLR+EDAL AT+AA + + +V + E+ DE K G I+ RAL P++ IA+NAG+ GSV+ EK+ +S+ G++A Y D++ GI+DP KV R L++A SVA L ++ VV + EPE PA+PAG P Sbjct: 388 KEKKLRIEDALAATRAAVEEGIVAGGGTAFINVIPEVAKLLESTSGDE-KTGVQIILRALEEPVRQIAENAGLEGSVIVEKIKTSEKGM-GFDALNEKYIDMIEGGIVDPAKVTRSALQNAVSVAAMVLTTESVVADKPEPEAPAVPAGMP 536
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BUCCC (60 kDa chaperonin OS=Buchnera aphidicola subsp. Cinara cedri GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNH-KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KEKK RVEDAL+AT+AA L+R++ K+ I N+++ VG + RA+ PL+ I N+G SVV+ V D H YGYNAAT Y D+++ GI+DPTKV R L++A+SVA + ++C+V ++ + E + N +G G Sbjct: 390 KEKKARVEDALHATRAAVEEGVVPGGGVALVRVAEKISRING--QNEDQNVGIRVALRAMEAPLRQIVANSGEEPSVVTNNV--KDGHGNYGYNAATDEYGDMISFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKDEKSSSELNSAPGNGMG 543
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BARBK (60 kDa chaperonin OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=groL PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 63/151 (41.72%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAG 446 KEKK RV+DALNAT+AA LLR ++K +IK N +++ G I++RAL P + IA NAG +V+ KVL + + +GYN AT + DL++ GI+DP KVVR L++A+S+A + ++ +V E+ + E PAMP G Sbjct: 390 KEKKDRVDDALNATRAAVEEGIVPGGGTALLR-AAKALSIKGK--NPDQEAGIGIIRRALQAPARQIAHNAGEEAAVIVGKVLENCSDTFGYNTATAQFGDLISFGIVDPVKVVRSALQNAASIASLLITTEAMVAEVPKKEAAAPAMPGG 537
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACST (60 kDa chaperonin OS=Bacillus stearothermophilus GN=groL PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 65/150 (43.33%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV----EIKEPEPAMP 440 KE+KLR+EDALN+T+AA L+ + SKV AI+ D E G IV RA+ P++ IA+ AG+ GS++ E+ L ++ G+NAATG + D++ AGI+DPTKV R L++A+SVA FL ++ VV E K P MP Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTALMNVYSKVAAIEAEGD---EATGVKIVLRAIEEPVRQIAQTAGLEGSIIVER-LKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAASVAAMFLTTEAVVADKPEENKGGNPGMP 533
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 64/157 (40.76%), Postives = 93/157 (59.24%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 473 KE+KLR+EDALN+T+AA L+ + V +I D E G +IV RAL P++ IA NAG+ GSV+ E+ L + +G+NAATG + +++ AGI+DPTKV R L+HA+SV+ FL ++ V+ + +PE G D G G Sbjct: 388 KERKLRIEDALNSTRAAVEEGIVAGGGTALVNVIKAVSSIGAEGD---EATGVNIVLRALEEPVRQIAHNAGLEGSVIVER-LKKEEAGFGFNAATGEWVNMVEAGIVDPTKVTRSALQHAASVSAMFLTTEAVIAD--KPEENEGGGGMPDMGGMG 538
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_SYNFM (60 kDa chaperonin 2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=groL2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE---IKEPEPAMPAGNPMD 458 KEKK RVEDALNAT+AA LLR + A+++ + E+ G IV RAL P++ IA NAG GSVV ++V +G+NA T YEDL AAG+IDPTKVVR L++A+SVA L ++ ++ E ++P PAMP D Sbjct: 390 KEKKARVEDALNATRAAVEEGIVPGGGVALLRC---LPALEKLDLHGEDAFGVKIVMRALEEPVRQIANNAGHEGSVVVQQVKQGTG-SHGFNADTEVYEDLSAAGVIDPTKVVRFALQNAASVASLLLTTEAMIAEKPKKQKPAPAMPGAGMED 540
BLAST of CF835719 vs. ExPASy Swiss-Prot
Match: CH602_RHOBA (60 kDa chaperonin 2 OS=Rhodopirellula baltica GN=groL2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.598e-23 Identity = 58/142 (40.85%), Postives = 87/142 (61.27%), Query Frame = 3 Query: 3 KEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE 428 K+ K R+EDAL+AT+AA L+ V+A K+ DE K+G DIV AL P++ IA N G++GSVV ++VL ++ K G+NA TG Y D++ AG+IDP KVVR L +A+S+A L ++ +V ++ + Sbjct: 389 KQTKARLEDALHATRAAVEEGILPGGGVALVHCREAVEAAKKKAKGDE-KIGVDIVLGALDAPMRQIADNGGIDGSVVVDEVLQKNDPKIGFNAHTGEYTDMVKAGVIDPVKVVRTALTNAASIAGLLLTTEALVTNFEQED 529 The following BLAST results are available for this feature:
BLAST of CF835719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835719 ID=CF835719; Name=CF835719; organism=Citrus sinensis; type=EST; length=767bpback to top |