CF835775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 4.946e-47 Identity = 98/183 (53.55%), Postives = 127/183 (69.40%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 708 L KLLLIGDSGVGKSCLLLR KI+TIELDGK IKLQIWDTAGQERF TIT++YYRGA G L+VYDVTD+ S+ N++ W++ I++HAS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+++ S E +KI+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKQMGPGAASGGERPNLKID 189
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.102e-46 Identity = 96/167 (57.49%), Postives = 121/167 (72.46%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 663 L KLLLIGDSGVGKSCLLLR KIRTIEL+GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LVGNK+D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRL 173
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.439e-46 Identity = 96/165 (58.18%), Postives = 119/165 (72.12%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 657 L KLLLIGDSGVGKSCLLLR KIRTI LDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD SFNN++ W++ I+++A D+V ++LVGNK D+ E K+ V TS + AD GI F ETSAK++ NVE+ F +A +IK+ Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIE-KKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEIKK 171
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.469e-46 Identity = 92/166 (55.42%), Postives = 115/166 (69.28%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 660 ++KLLL+GDSGVGKSCLLLR KIRTIE GKRIKLQ+WDTAGQERFRTITTAYYRGAMGI+L+YDVTD SF N+ NW + + QHA+++ LVGNK D DE R V +GQ LA + + F E SAK+N NV+ +F+ +A I+++ Sbjct: 14 IMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCD-DEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: YPT1_YEAST (GTP-binding protein YPT1 OS=Saccharomyces cerevisiae GN=YPT1 PE=1 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 9.653e-43 Identity = 87/168 (51.79%), Postives = 117/168 (69.64%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 666 L KLLLIG+SGVGKSCLLLR KI+T+ELDGK +KLQIWDTAGQERFRTIT++YYRG+ GI++VYDVTD+ SFN ++ W++ I+++A+ V K+LVGNK D+ + KR V + AD + F ETSA + NVE+ F ++AR IK+ ++ Sbjct: 8 LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDL-KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.150e-42 Identity = 87/165 (52.73%), Postives = 116/165 (70.30%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 657 L+K+L+IGDSGVGKSC+LLR IRTIELDGK+IKLQIWDTAGQERF+TITT+YYRGA G+++VYD+T SFN+I+ W+ ++++ AS +V K++VGNK D++ SKRAV + ADE I ETSAK + ++E F +A DIK+ Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLN-SKRAVDFKIAKKFADELNIPIMETSAKESTAIDEAFIKLASDIKK 196
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.056e-41 Identity = 85/184 (46.20%), Postives = 122/184 (66.30%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA---DTDSRAEPQTIKI 705 + KLL+IG+S VGK+ L R K++T+ KR+KLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN++++W I+ ++ +N +LVGNK DMD S+R V +G+ LAD+ G++FFETSAK N+NV+ VF + I ++A D D + +P+ K+ Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMD-SERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDPQQQPKGQKL 204
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.035e-41 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 657 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+GNKAD +E KR V +GQ LA EYG+ F+ETSA TNLN++E F + + Q Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQ 171
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.035e-41 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 657 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+GNKAD +E KR V +GQ LA EYG+ F+ETSA TNLN++E F + + Q Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESFTRLTELVLQ 171
BLAST of CF835775 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40 Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 657 L +LLLIGDSGVGK+CLL R K++TIE+DG ++++QIWDTAGQER++TIT YYR A GI LVYD++ E S+ +I W+ +++++A + V KIL+GNKAD +E KR V +GQ LA EYG+ F+ETSA TNLN++E F + + Q Sbjct: 8 LFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKAD-EEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVLQ 171 The following BLAST results are available for this feature:
BLAST of CF835775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835775 ID=CF835775; Name=CF835775; organism=Citrus sinensis; type=EST; length=759bpback to top |