CF835776
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 78/165 (47.27%), Postives = 114/165 (69.09%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 660 K++L+GDSGVGK+C L++ + + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YD+T++SSF+NIR W+ I ++A +V +L+GNKAD+ S+R + + G+ LA EYG+ F ETSAKT +NVE F +IA+++K R Sbjct: 31 KVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADV-SSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYR 194
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.955e-38 Identity = 81/183 (44.26%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN 708 L K+++IGDSG GKS LLLR KI+T+++D IKLQIWDTAGQERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+GNK D+ +S R V + + +A++ + + E SAKT+ NVE+ F +IA+ +K ++ S A T+ ++ Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDS-RVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPTSTVNLS 188
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 5.166e-38 Identity = 78/165 (47.27%), Postives = 114/165 (69.09%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 660 K++L+GD+GVGK+C L++ + + + +DG R+KLQIWDTAGQERFR++T AYYR A +LL+YD+T++SSF+NIR W+ I ++A +V +L+GNKADM S+R + + G+ LA EYG+ F ETSAKT +NVE F +IA+++K R Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADM-SSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYR 194
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 1.963e-37 Identity = 79/176 (44.89%), Postives = 120/176 (68.18%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQ 693 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAGQERFR++T AYYR A +LL+YD+T++ SF+NI+ W+ I+++A +V +L+GNK D + +R V G+ LA EYG+ F ETSAK+ LNV+ F +IA+++KQR T + +EP+ Sbjct: 66 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQ-ERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQR--STKAPSEPR 238
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.963e-37 Identity = 78/171 (45.61%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDS 678 K++L+GDSGVGK+CLL+R + + +++DG ++KLQIWDTAGQERFR++T AYYR A +LL+YD+T++ SF+NI+ W+ I+++A +V +L+GNK D + R V G+ LA EYG+ F ETSA+T LNV+ F +IA+++KQR A S Sbjct: 69 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQD-RVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RABG2_DICDI (Ras-related protein RabG2 OS=Dictyostelium discoideum GN=rabG2 PE=3 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 78/163 (47.85%), Postives = 109/163 (66.87%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 + K+LLIGDS VGK+ LLLR K + I +DG+ LQIWDTAGQERFRTIT+++YRGA G+L+ YDVTD+ ++NN+R W++ I+++A V+++LVGNK D+ E ++ V TS + AD GI F E SA T +NVEE F ++A +I Sbjct: 6 VFKILLIGDSAVGKTSLLLRFADNSFQETSVNMTSVDYKNKNIVIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVRLWMQEIQRYAVLGVSRVLVGNKCDL-EDRKLVNTSIAREYADSLGIPFMEASAATGVNVEEAFMAMANEI 167
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 5.711e-37 Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 630 + KLLLIG+S VGK+ L R K++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R V GQ LA + G +FFE SAK N+NV++VF Sbjct: 22 MFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVF 176
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 9.742e-37 Identity = 77/165 (46.67%), Postives = 113/165 (68.48%), Query Frame = 1 Query: 169 KLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXX-KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 660 K++L+GDSGVGK+CLL+R + + +++DG ++KLQ+WDTAGQERFR++T AYYR A +LL+YDVT+++SF+NI+ W+ I ++A +V +L+GNK D +R V G+ LA EYG+ F ETSAKT LNV+ F +IA+++KQR Sbjct: 65 KVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD-SAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 228
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 152.91 bits (385), Expect = 1.662e-36 Identity = 85/200 (42.50%), Postives = 116/200 (58.00%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----------KQRLADTDSRAEPQTIKINQPDQAGGA 732 L K++LIGDSGVGKS +L R RT +++GK IK QIWDTAGQER+R IT+AYYRGA+G LLVYD+T +F+N+ W+R + HA N+ ++ GNK+D++ R+V GQ+LA++ G+ F ETSA NVE+ F +I +I Q A +S Q IN D +GGA Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNH-LRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGA 210
BLAST of CF835776 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.835e-36 Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 1 Query: 163 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI 651 L K++LIGDSGVGKS +L R RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G LLVYD+T +F+N++ W+R + HA N+ ++ GNK+D+ + RAV GQALA++ G+ F ETSA +N+E+ F +I +I Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDL-KHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEI 173 The following BLAST results are available for this feature:
BLAST of CF835776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835776 ID=CF835776; Name=CF835776; organism=Citrus sinensis; type=EST; length=736bpback to top |