CF835787

Overview
NameCF835787
Unique NameCF835787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_GEOMG (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=argC PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.708e-25
Identity = 57/113 (50.44%), Postives = 78/113 (69.03%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            +T++FTPH +PM RG+ STIY  +    ++ +L +     YE E FV++L  G VP T +VRGSN+C + +  D   GR I++S IDNLVKGA+GQA+QN+NIM GFPE  GL
Sbjct:  227 ITITFTPHLVPMDRGILSTIYARLTGTDSVAELVKLYAEFYEGEPFVRVLPAGNVPSTAHVRGSNFCDIGLAVDSRTGRVIVVSAIDNLVKGAAGQAVQNMNIMYGFPETMGL 339          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_PELPD (N-acetyl-gamma-glutamyl-phosphate reductase OS=Pelobacter propionicus (strain DSM 2379) GN=argC PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            KVT++FTPH +PM RG+ STIY     GVT E+L +  +  Y  E FV++L  G +P T  VRGSN+C +    D+  GR I++S IDNL+KGASGQA+QN+NI+ GF E+ GL
Sbjct:  226 KVTLTFTPHLVPMDRGILSTIYATPLKGVTTEELNELYRNFYAEEPFVRVLPLGSLPSTAFVRGSNFCDIAPVVDKRTGRVIVVSAIDNLMKGASGQAVQNMNIVCGFYESAGL 339          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_GEOSL (N-acetyl-gamma-glutamyl-phosphate reductase OS=Geobacter sulfurreducens GN=argC PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.478e-25
Identity = 58/114 (50.88%), Postives = 75/114 (65.79%), Query Frame = -3
Query:  520 KVTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 861
            ++T++FTPH  PM RG+ STIY  +    T  +L       Y  E FV++L  G VP T +VRGSN+C + V  D+  GR I++S IDNLVKGASGQA+QN+NIM G PE  GL
Sbjct:  226 RITITFTPHLAPMDRGILSTIYGRLLTPATTAELAGLYAEFYGGEPFVRVLPAGGVPSTAHVRGSNFCDIGVVVDQRTGRVIVVSAIDNLVKGASGQAVQNMNIMCGLPEGLGL 339          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAAW (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain MW2) GN=argC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAAS (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain MSSA476) GN=argC PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAAR (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain MRSA252) GN=argC PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMARGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAAC (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain COL) GN=argC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAA8 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain NCTC 8325) GN=argC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_STAA3 (N-acetyl-gamma-glutamyl-phosphate reductase OS=Staphylococcus aureus (strain USA300) GN=argC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 56/113 (49.56%), Postives = 76/113 (67.26%), Query Frame = -3
Query:  520 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGL 858
            V+V FTPH +PM RG+ STIYV+++   T E L + +   Y ++ FV++ + G  P T  V GSNYC + ++ D     AI++SVIDNLVKGASGQA+QNLNI+  F   TGL
Sbjct:  224 VSVIFTPHLVPMTRGILSTIYVKLSSEYTTESLHKLMTSYYANQPFVRIRDIGTFPTTKEVLGSNYCDIGIYVDETTQTAILVSVIDNLVKGASGQAIQNLNILYDFEVTTGL 336          
BLAST of CF835787 vs. ExPASy Swiss-Prot
Match: ARGC_DESAP (N-acetyl-gamma-glutamyl-phosphate reductase OS=Desulforudis audaxviator (strain MP104C) GN=argC PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.495e-24
Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = -3
Query:  514 VTVSFTPHXMPMIRGMQSTIYVEMAPGVTIEDLCQQLKISYEHEEFVKLLEKGVVPRTHNVRGSNYCLMNVFPDRIPGRAIIISVIDNLVKGASGQALQNLNIMMGFPENTGLLY 858
            +TV+FTPH +PM+RG+ +TIY   A     ++L +     Y  E FV++L  G++P+T  V G+N+C + V PD   GR I++S IDNL+KGASGQA+QNLN++ G  E TGL++
Sbjct:  227 LTVAFTPHLVPMVRGILATIYTRPAVLPDRDELYELYADYYREEPFVRVLPPGMLPQTKAVAGTNHCDLAVVPDPRTGRVIVLSAIDNLMKGASGQAVQNLNLIFGLDETTGLVF 341          
The following BLAST results are available for this feature:
BLAST of CF835787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 308
Match NameE-valueIdentityDescription
ARGC_GEOMG1.708e-2550.44N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_PELPD2.914e-2551.75N-acetyl-gamma-glutamyl-phosphate reductase OS=Pel... [more]
ARGC_GEOSL8.478e-2550.88N-acetyl-gamma-glutamyl-phosphate reductase OS=Geo... [more]
ARGC_STAAW5.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_STAAS5.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_STAAR5.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_STAAC5.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_STAA85.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_STAA35.495e-2449.56N-acetyl-gamma-glutamyl-phosphate reductase OS=Sta... [more]
ARGC_DESAP5.495e-2446.96N-acetyl-gamma-glutamyl-phosphate reductase OS=Des... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O07_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835787 ID=CF835787; Name=CF835787; organism=Citrus sinensis; type=EST; length=863bp
CCCTTTGAGAAGTAATATATCGAATTTTACATAATTAAATGTCTGGTAAT
ACAATAAAATCATGCCAATCATCAAGAGGCAGCCATGTAATCCTAACAAT
TGGAAGACTAACTTGAATAAAAAGCACTTCTAATTGGTGTATTGAGGTGT
TACCACCACTTGCAAGCACAAAATGTTAAACCAATTTCTCAAAATTCCCT
CAACACTGATAAGTGAATATTCATTATTACACAAATGGACTCCTGTTATA
CTATTCTACATGCTTCTAGCACCACTCTTCTCTGACAATTCGACGAAATG
GAGGAACTCTTCAAAAGGGTGTCGGAGCTTTGAAAACAAAATTCCCCCAA
AGTAACCTGAACTGTTCCTGAACAGCCTCCATAGTCGATAGACGAAATAT
ACTAATTTTCAAGAGAGTTTTGGGTAGGCTAAGAGAGATTTGTTAATTAG
TGTTGAAAATGCCTGCTTACTCTTTAAACATATTAAGAAAAGAAACTAAG
GAAACAAGGGCTGATATAGAAGCCCAGTATTTTCCGGAAATCCCATCATT
ATGTTAAGATTTTGAAGAGCTTGACCTGATGCTCCCTTCACAAGATTATC
AATAACTGATATAATTATTGCTCTTCCAGGAATTCGATCAGGAAAGACAT
TCATCAAACAGTAATTAGAACCTCGAACATTGTGAGTCCGAGGGACAACT
CCCTTTTCCAACAACTTCACAAATTCCTCATGCTCATAGGAGATTTTTAA
TTGCTGGCATAAATCCTCGATTGTCACTCCTGGAGCCATTTCAACGTATA
TAGTTGATTGCATGCCTCGGATCATTGGCATTANGTGTGGAGTGAAACTG
ACTGTTACTTTTG
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