CF835832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_PIG (60S ribosomal protein L27 OS=Sus scrofa GN=RPL27 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_MOUSE (60S ribosomal protein L27 OS=Mus musculus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_MACFA (60S ribosomal protein L27 OS=Macaca fascicularis GN=RPL27 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_HUMAN (60S ribosomal protein L27 OS=Homo sapiens GN=RPL27 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_CHICK (60S ribosomal protein L27 OS=Gallus gallus GN=RPL27 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_CERNI (60S ribosomal protein L27 OS=Cervus nippon GN=RPL27 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_BOVIN (60S ribosomal protein L27 OS=Bos taurus GN=RPL27 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.180e-37 Identity = 77/136 (56.62%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_CANFA (60S ribosomal protein L27 OS=Canis familiaris GN=RPL27 PE=2 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 2.629e-37 Identity = 76/136 (55.88%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+KP V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EE++KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27B_YEAST (60S ribosomal protein L27-B OS=Saccharomyces cerevisiae GN=RPL27B PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.434e-37 Identity = 71/136 (52.21%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KFLK ++++GRYAG+K VIVK D+G++ +GH LVAGI++YP KV +K AKK AK++++K F+K+VNY HL+PTRYTLDV+ K VVS ++ + ++ A K KK EER + GKN+WFF+KLRF Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27A_YEAST (60S ribosomal protein L27-A OS=Saccharomyces cerevisiae GN=RPL27A PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 9.990e-37 Identity = 71/136 (52.21%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KFLK ++++GRYAG+K VIVK D+G++ +GH LVAGI++YP KV +K AKK AK++++K F+K+VNY HL+PTRYTLDV+ K VVS ++ + ++ A K KK EER + GKN+WFF+KLRF Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLRF 136 The following BLAST results are available for this feature:
BLAST of CF835832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835832 ID=CF835832; Name=CF835832; organism=Citrus sinensis; type=EST; length=645bpback to top |