CF835832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_CAEEL (60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.916e-34 Identity = 67/136 (49.26%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M K +KP V++L+G+YAGRKAV+VK D+G +R Y H ++AGI +YP KV + KK K++++K F+K+V+Y HL+PTRY++DV K ++ ++L++ KK A E K + EER+KTGKN+WFFTKLRF Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.916e-34 Identity = 64/136 (47.06%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVK LKP ++ +GR+AG+K VI+++ D G++ +GH +VAG+++YP KV + AK+ A++SRVK F+K+VNY HLMPTRY L++D LK +++AD+ + ++ A K KK EE++++GK+ WFFT LRF Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.303e-33 Identity = 68/136 (50.00%), Postives = 95/136 (69.85%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 M KF+K I+++GRYAG+K VIVK D+GT+ + H +VAGI++ P KV +K AKK K+++VK FVKLVNY HLMPTRY+LDV+ K V++++L+ ++ A K KK EE+ + GKN+WFF KL F Sbjct: 1 MAKFIKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27B_SCHPO (60S ribosomal protein L27-B OS=Schizosaccharomyces pombe GN=rpl27b PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.950e-32 Identity = 63/136 (46.32%), Postives = 95/136 (69.85%), Query Frame = 3 Query: 30 MVKFLKPNMAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 MVK LKP ++ +GR+AG+K VI+++ D G++ +GH +VAG+++YP KV + AK+ AK+SRVK F+K++NY HLMPTRY L++D LK +V+ + ++ A K K EE+++TGK+ WFFT LRF Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136
BLAST of CF835832 vs. ExPASy Swiss-Prot
Match: RL27_DICDI (60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.264e-31 Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 3 Query: 36 KFLKPNMAVILLQGRYAGRKAVIVKSFDDGT--RERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLD-------VDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 434 KF+KP VILL G+YAGRKAV++K+FDD T + R YGHCLVAGI KYP ++R S K K++ +++FVK+VNY H+MPTRY + LK+ V+ +S Q K+ KK E + K GK++WFF+KLRF Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVA-KRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144 The following BLAST results are available for this feature:
BLAST of CF835832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835832 ID=CF835832; Name=CF835832; organism=Citrus sinensis; type=EST; length=645bpback to top |