CF835837

Overview
NameCF835837
Unique NameCF835837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:253..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 1.052e-36
Identity = 98/252 (38.89%), Postives = 137/252 (54.37%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICG 758
            F+ F  ++ K Y   EE   RF +FK NL   +       +   GV +F+DLT  EF+R  LG  +     A  + +  +    LP   DWR+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N ++ + DE + A  LV+  P+++    +   + Y  GV     CG
Sbjct:   59 FARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCS--ATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGAFNNYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCG 297          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.373e-36
Identity = 89/253 (35.18%), Postives = 136/253 (53.75%), Query Frame = 3
Query:    3 NAEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT-------NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVS 740
            NA+ LF+ F  K++K Y   +E + RF +FK NL     R  L+ +A+  +   +D++ +E  ++  GL   L +  + + +   PT         +P  FDWRD  +VT VK Q  CGSCW+FSA   +E  + +     + LSEQQLVDCD           ++GCNGGLM+ AFE I++AGG+  E  YPYTG D G CK + ++       ++     E ++   L + GP++V I+ V +  Y  GV+
Sbjct:   38 NAQELFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNELLQKLTGLKLSL-MRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVD-GVCK-NTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVA 278          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.794e-36
Identity = 96/256 (37.50%), Postives = 130/256 (50.78%), Query Frame = 3
Query:   27 FKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDH 773
            FK+++ + Y   +E  YR RVF+ N +      K+ +  + T    + +F D+T  EF     G  +  R   + +         +  D DWR    VT VKDQ  CGSCW+FSATGALEG HFL   ELVSLSEQQLVDC  +         + GC GG M SAF+YI   GG++ E  YPY   D  SC+FD + I A  +    +   E+ +   +   GP++V I+A     Q Y  GV     C   +LDH
Sbjct:   23 FKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEEFNAVMKGYKKGSR--GEPKAVFTAEAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED-RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDH 268          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.794e-36
Identity = 92/237 (38.82%), Postives = 135/237 (56.96%), Query Frame = 3
Query:   45 KTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLNRRLRLPAD-AQKAPILPTNDLPTDFDWRDHGAVTG-VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI--AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            K Y    E + RF++FK NL+R +     DP   +  G+ KFSDLT  EF+  +LG     +  +D A++      + LP + DWR+ GAV   VK QG CGSCW+F+ATGA+EG + ++TGELVSLSEQ+L+DCD        G+ + GC GG    AFE+I + GG+  ++ Y YTG D  +CK  + K      ++   V+  +++      V + P++V I+A  M  Y  GV
Sbjct:   50 KNYNGLGEKERRFKIFKDNLKRIEEHNS-DPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDR-------GNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACKAIEMKTTRVVTINGHEVVPVNDEMSLKKAVAYQPISVMISAANMSDYKSGV 278          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.794e-36
Identity = 91/251 (36.25%), Postives = 139/251 (55.38%), Query Frame = 3
Query:    6 AEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRR--AKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            A   F  F   ++K Y +  E + R+ +FK NL    AK     D PTA + + KFSDL+ SE   +F GL+   R+ ++  K  IL  P +  P  FDWR+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ + I+A  +  Y  GV
Sbjct:   52 APDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKFSDLSKSELIAKFTGLSIPERV-SNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGV 291          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.996e-36
Identity = 86/258 (33.33%), Postives = 141/258 (54.65%), Query Frame = 3
Query:    6 AEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDH 773
            A + F  F  KF+K+Y+++ E   RF++F+ NL     +   D TA + + KF+DL+  E   ++ GL+  L+     +   +  P +  P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE ++  GG++ E DYPY   + G C+ + +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H
Sbjct:   24 APNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADLSKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNMGGIQAESDYPYE-ANNGDCRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAIDASDIVNYKRGI-MKYCANHGLNH 270          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.219e-36
Identity = 97/246 (39.43%), Postives = 130/246 (52.85%), Query Frame = 3
Query:   66 EHDYRFRVFKANLR-------RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTG-VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDH 773
            EH+ RFRVF  NL+       RA  R         G+ +F+DLT  EFR  +LG     R     +         LP   DWRD GAV   VK+QG CGSCW+FSA  A+EG + + TGELVSLSEQ+LV+C            +SGCNGG+M+ AF +I + GG++ E+DYPYT  DG      +S+   ++  F  +  +++      V H P++V I+A     Q Y  GV     CG  LDH
Sbjct:   84 EHERRFRVFWDNLKFVDAHNARADERGGFRL----GMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQ-------NSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDH 317          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.219e-36
Identity = 99/252 (39.29%), Postives = 138/252 (54.76%), Query Frame = 3
Query:   18 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDS-GCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICG 758
            FS F  ++ K Y + EE   RF VFK NL   +       +    + +F+DLT  EF+R  LG  +     A  + +  +    +P   DWR+ G V+ VK+QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC        +G+ ++ GC+GGL + AFEYI   GG++ E+ YPYTG DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV     CG
Sbjct:   59 FSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNCS--ATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDC--------AGTFNNFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCG 297          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.816e-36
Identity = 90/250 (36.00%), Postives = 139/250 (55.60%), Query Frame = 3
Query:    6 AEHLFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ---KAPIL--PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV 737
            A + F  F  +F+K Y+++ E   RF++F+ NL     +   D +A + + KFSDL+  E   ++ GL+    LP   Q   K  +L  P    P +FDWR    VT VK+QG CG+CW+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I+A  +  Y  G+
Sbjct:   24 APNYFEEFVHRFNKNYSSEVEKLRRFKIFQHNLNEIINKNQND-SAKYEINKFSDLSKDETIAKYTGLS----LPTQTQNFCKVILLDQPPGKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI 258          
BLAST of CF835837 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 1.163e-35
Identity = 91/251 (36.25%), Postives = 133/251 (52.99%), Query Frame = 3
Query:   42 SKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYIC-GKYLDH 773
            +K Y T +E   R+  FK N+             V G+ + +DL+  E+R  +LG    ++L    ++   L  N      P + DWR+  AVT VKDQG CGSC+SFS TG++EG   + TG+LVSLSEQ ++DC        S   + GCNGGLM +AFEYI+K  G+  E+ YPY       CKF +  +AA ++++  I + ++    N +   P++V I+A     Q Y  GV     C  + LDH
Sbjct:   42 NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHIKLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAIKTGKLVSLSEQNILDC-------SSSFGNEGCNGGLMTNAFEYIIKNNGLNSEEQYPYEMKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVYYEPACSSEDLDH 284          
The following BLAST results are available for this feature:
BLAST of CF835837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
ALEU_ARATH1.052e-3638.89Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CATV_GVXN1.373e-3635.18Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSP3_HOMAM1.794e-3637.50Digestive cysteine proteinase 3 OS=Homarus america... [more]
CPR2_ARATH1.794e-3638.82Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CATV_NPVLD1.794e-3636.25Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATV_NPVCF3.996e-3633.33Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CYSP1_ORYSJ5.219e-3639.43Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
ALEUL_ARATH5.219e-3639.29Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATV_NPVBM6.816e-3636.00Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CYSP3_DICDI1.163e-3536.25Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P17_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835837 ID=CF835837; Name=CF835837; organism=Citrus sinensis; type=EST; length=774bp
TGAACGCGGAGCACCTCTTCTCCCTCTTCAAGTCCAAATTCTCCAAGACT
TACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCTAA
CCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCACG
GTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGTTC
CTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCTCC
TATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCACG
GCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGTCG
TTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGCGA
GCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTGTG
ATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAATG
AACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAGAA
GGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAAAA
GCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATGAA
GATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGGGTAT
CAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCATACA
TTTGCGGGAAGTATTTGGATCATG
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