CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.899e-23
Identity = 57/183 (31.15%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTER-KFKDTVSSILVEIGKPNLSDHFP 705
            +IGNL +LGE PH+SL +L+K YGP++ LKLG V TV+VS+   AK +L+D+D    +R   +      +N   +        WK LRKLC   +F  +++++ Q ++  +++ L+  + E+      +++S    + ++N++   +F V+         KF+D V   L  +G  + SD FP
Sbjct:   39 IIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQGTVLNNDKFQDLVHEALEMLGSFSASDFFP 221          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.458e-23
Identity = 69/237 (29.11%), Postives = 119/237 (50.21%), Query Frame = 1
Query:   64 IWLL----FTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDT-TERKFKDTVSSILVEIGKPNLSDHFPLLKRL-----DLQGIRSR 744
            IWLL      C+ V   +  +R   +          +IGNL +LGE PH+SL +L+K YGP++ LKLG V TV+VSS+  AK  L+ HD    +R          +N   +   P    WK +RKL    +F+++++ + Q ++ +++K L+  + E+      I++++ +   +++++  T FSV+         +F + V   L  +G  + SD  P + R+      LQG R R
Sbjct:    4 IWLLSLIFVICILVAVFNHKNRRNYQRTPPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCRTAFSVNFEGTVLNSERFNNIVREALEMLGSFSASDFIPYVGRIIDLLTGLQGRRER 240          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.879e-22
Identity = 58/223 (26.01%), Postives = 117/223 (52.47%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLL 711
            MD+L  +  L+     ++A S   R  KK          +IGNL +LGEKPH+++ EL+K YGP++SLKLG VTTVV +S    + +L+ +D    +R          +N   +V  P    W+ +RKL  + ++T +++ + + +R +++ + + + ++   + + +++SQ +   S +++    F ++L     E  +++ +      +G     D+FP++
Sbjct:    1 MDLLYIVAALVIFASLLIAKSK--RKPKKNLPPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLEGSKLENTYQEIIVQAFEVLGSLAAVDYFPVI 221          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22
Identity = 65/198 (32.83%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS--VDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            V+G L  LG  PH +LA +AK YGP++ LK+G     V S+   AK  L+  D +F NR          +N   MV       WK LRKL N+HI   + L   +E+R+K++  +L  + E+ R G+ + +S+++     N+L   + S  V  +  +   +FKD V  ++   G  N+ D  P +  +DLQGI+  M
Sbjct:   46 VLGALRLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGM 243          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C75A5_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A5 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22
Identity = 65/198 (32.83%), Postives = 102/198 (51.52%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS--VDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            V+G L  LG  PH +LA +AK YGP++ LK+G     V S+   AK  L+  D +F NR          +N   MV       WK LRKL N+HI   + L   +E+R+K++  +L  + E+ R G+ + +S+++     N+L   + S  V  +  +   +FKD V  ++   G  N+ D  P +  +DLQGI+  M
Sbjct:   46 VLGALPLLGTMPHVALANMAKKYGPVMYLKVGSCGLAVASTPEAAKAFLKTLDMNFSNRPPNAGATHLAYNAQDMVFADYGPRWKLLRKLSNIHILGGKALQGWEEVRKKELGYMLYAMAESGRHGQPVVVSEMLTYAMANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYFNIGDFIPSIAWMDLQGIQGGM 243          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.140e-22
Identity = 59/237 (24.89%), Postives = 123/237 (51.90%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL-ADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            M +L  +++L     F +   +  R +K           +IGNL +LG  PH+SL  LA   GP++ L LG + T++VS+A +A+ IL+ HD  F +R    A     ++   +   P    W+ +RK+C L + + +++++ + +R +++  ++  + ++C  G+A+++S+++   S   ++   F      ++  + KF D  + +   +G   + D+FP    +D L G+ +R+
Sbjct:    1 MAILVSLLFLAIALTFFLLKLNEKREKKPNLPPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYEGEEERKNKFADLATELTTLMGAFFVGDYFPSFAWVDVLTGMDARL 237          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.325e-22
Identity = 69/241 (28.63%), Postives = 118/241 (48.96%), Query Frame = 1
Query:   49 MLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXX----VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAG-KAIDISQVVFNTSLNLLSNTIFSVDLADDTTERK---FKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            M +  + +L   V  + L  FS  R +              +IGNL  +G KPH++L+ +   YGPIL L+LG V  VV +S  +A+  L+ HD++F +R          +N   +V  P    W+ LRK+ ++H+F+ + L+  + +R++++  L     E  R G K +++ Q+V    +N L   +    L     + K   F+  V+ ++   G  N+ D  P L  LDLQG+  +M
Sbjct:    1 MATLFLTILLATVLFLILRIFSHRRNRSHNNRLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQFLKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVRQEEVGTL---TRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHKADEFRSMVTEMMALAGVFNIGDFVPSLDWLDLQGVAGKM 238          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C75A1_PINTA (Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 58/197 (29.44%), Postives = 108/197 (54.82%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGK-AIDISQVVFNTSLNLLSNTIFSVDLADD---TTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIR 738
            +IGN  ++    H++L  LA+ YGPIL L+ G V TVVVSS+  AK+ L+ HD  F +R          +N   +   P    W+ +RK+C L + T++++++ + +R++++  ++  + E   +G+ A+++S+ +  +  N+L   +     +D+      + F D V  + + +G  N+ D  P L  LDLQGI+
Sbjct:   51 IIGNFHQVRLPLHRTLKNLAEKYGPILFLRFGSVPTVVVSSSEKAKHFLKTHDLIFASRPPTSVGKYFFYNFKDIAFSPYGDHWRKMRKICVLELLTSKRIESFKHVRQEELSAMIHSIWEESESGRIAVNVSKAISTSLANILWRILARKKFSDNDLGADGKGFADLVVEVSIAVGSLNIGDFIPYLDCLDLQGIK 247          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 59/213 (27.70%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   70 LLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDT-TERKFKDTVSSILVEIGKPNLSDHFP 705
            L  +C+ + AL    R + +          +IGNL +LGE PH+SL  L+K YGP++ LK G + TVVVSS+  AK  L+ HD +  +R          +N   +V  P +  WK LR++C   +F+ +++   Q +R +++K L++   E+      +++S+ + + ++ ++    F V           F   +    + +G  + SD+FP
Sbjct:   10 LFLSCLLLAALRLKKRRQHQRKPPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFGVSFQGTVLNSDNFDKLIHDAFLFLGSFSASDYFP 222          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.591e-21
Identity = 57/213 (26.76%), Postives = 106/213 (49.77%), Query Frame = 1
Query:   70 LLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDT-TERKFKDTVSSILVEIGKPNLSDHFP 705
            L  +C+ + A +   R + +          +IGNL +LGE PH+SL  L+K YG ++ LK G + TVVVSS+  AK +L+ HD    +R          +N   +   P    WK LR++C   +F+ +++ + Q ++  ++K L+  V E+   G  +++S+   + ++ +     F V+         +F+  +    + +G  + SD+FP
Sbjct:   10 LFLSCILLAAFTHKKRQQHQRKPPSPPGFPIIGNLHQLGELPHQSLWRLSKKYGHVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGTPVNLSEKFTSLTVRVTCKATFGVNFQGTVLNSDRFEKLIHDTYLFLGSFSASDYFP 222          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71BA_ARATH2.899e-2331.15Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH6.458e-2329.11Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR1.879e-2226.01Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C75A7_EUSGR4.186e-2232.83Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C75A5_EUSGR5.467e-2232.83Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
C71A1_PERAE7.140e-2224.89Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
F3PH_ARATH9.325e-2228.63Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C75A1_PINTA1.218e-2129.44Cytochrome P450 750A1 OS=Pinus taeda GN=CYP750A1 P... [more]
C71BY_ARATH1.591e-2127.70Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71BX_ARATH1.591e-2126.76Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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