CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.489e-19
Identity = 60/234 (25.64%), Postives = 115/234 (49.15%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSR--GRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIR 738
            M+M+  I   L T + ++ L  F +    K           VIGNL +L   PH+SL  L+  YGP++ L  G V  +VVSS   A+ +L+ HD  F NR    A+    +    +V  P    W+ ++ +C L++ T + +++ +++R  ++  ++  +E+   +  + ++S++      ++ S        ++D T R  K  V  I+  +G+  + ++ P+L  +D  GIR
Sbjct:    1 MEMILSISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVPILAWID--GIR 232          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19
Identity = 53/225 (23.56%), Postives = 116/225 (51.56%), Query Frame = 1
Query:   61 IIWLLFTCVFVMA---LSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRL 720
            I W +    F  A   ++  +R  KK          +IGNL +LG KP +SL +L++ YG ++SLK G V+ VV S+    K +L+  D+   +R  M   A   +  N+  +   P S  W+ +RK+  + ++T +++ + Q +R++++ + + +++++    K +++ Q +   S +++    F + L        +++ +   +  +G+   +D+FP++ R+
Sbjct:    2 IWWFIVGASFFFAFILIAKDTRTTKKNLPPGPPRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSRPYMTYPARVTYNFND--LAFSPYSKYWREVRKMTVIELYTAKRVKSFQNVRQEEVASFVDFIKQHASLEKTVNMKQKLVKLSGSVICKVGFGISLEWSKLANTYEEVIQGTMEVVGRFAAADYFPIIGRI 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 57/203 (28.08%), Postives = 110/203 (54.19%), Query Frame = 1
Query:  160 VIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR---MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRMTF 753
            +IG++  L G  PH+ L +LAK YGP++ L+LGEV  ++VSSA  AK +++ HD +F +R   +  D +F   +    +   P    W+ +RK+CN+ + + +++ +   +R +++KNL+  +      G  +++SQ + +    + S + F     +   + +F   V  ++   G  N++D FP  K L+ L  +RS+  +
Sbjct:   28 IIGSIPHLVGSPPHRKLRDLAKKYGPLMHLQLGEVIFIIVSSAEYAKEVMKTHDVTFASRPRSLFTDIVF---YGSTDIGFSPYGDYWRQVRKICNVELLSMKRVQSLWPIREEEVKNLIQRIAS--EEGSVVNLSQAIDSLIFTITSRSAFGKRYME---QEEFISCVREVMKLAGGFNIADLFPSAKWLENLTRMRSKFEY 222          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.332e-19
Identity = 45/184 (24.46%), Postives = 98/184 (53.26%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLL 711
            VIGNL +L   PH++L+ L+  +GP++ L+ G V  ++VSSA +A  +++ HD  F NR +  +     +    +V  P    W+N++ LC +H+ + + + ++++ R ++I  L+  +EE   +  ++++S+++ N   +++   +     + +      K    S L  +G   + ++ P L
Sbjct:   41 VIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGEEGTIDVKTITKSFLDAVGLSPVGEYIPSL 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18
Identity = 58/238 (24.37%), Postives = 115/238 (48.32%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSR--GRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            M+M+  +   L T + +  L  F +    K           +IGNL +L   PH+SL  L+  YGP++ L  G V  +VVSS   A+ +L+ HD  F NR    A+    +    +V  P    W+ ++ +C L++ T + + + +++R +++  ++  +E+   +  + ++S++      ++ S        ++D T R  K  V  I+  +G+  + D+ P L  +D + G  +R+
Sbjct:    1 MEMILMVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVPALAWIDRINGFNARI 238          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.808e-18
Identity = 68/231 (29.44%), Postives = 100/231 (43.29%), Query Frame = 1
Query:   64 IWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKD-AIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS--VDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            I L+ T VF   L       K           +IG+L  L   PH+   +L+  YGPI+ L LG V  VV S+A  AK  L+ H+ +F NR     A+    +     +  P    WK ++KLC   +     LD    +R+ + K  +  V +   +G+A+D        S N++S  I S      D+    + +  V       GK N+SD    LKR DLQG   R+
Sbjct:    8 ICLISTIVFASILWRKQNKNKTLLPPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTEDENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRL 238          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.808e-18
Identity = 62/232 (26.72%), Postives = 116/232 (50.00%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMAL--SSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR---MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD 723
            M M+  II LL + + +  L     SRG+K           +I NL +LG  PH+SL  L+  YGP++ L  G V  +VVSSA  AK +L+ HD  F +R    + D IF   +N   + + P    W+ ++ +C LH+F+ + + + +++R+++I  ++  +     +   I++S+++ N + N++            T    FKD +  +   +G+ ++  +   L  +D
Sbjct:    1 MKMMMMIILLLCSIILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASRPRSKIFDKIF---YNGRDVALAPYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMIEKI--RISSSLRINLSEILVNLTNNVICRVALGRKYGGKT---DFKDLMKRLTRLLGEFSVGSYVSWLAWID 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C75A4_GENTR (Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.667e-18
Identity = 60/198 (30.30%), Postives = 96/198 (48.48%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS--VDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            ++G L  LG  PH + A +AK YG ++ LK+G     + S+   AK  L+  D +F NR          +N   MV       WK LRKL NLH+   + L+   ++R+ ++  +L  + E+ +  + + IS+++     N+LS  I S  V         +FKD V  ++   G  N+ D  P +  +DLQGI   M
Sbjct:   50 ILGALPLLGNMPHVTFANMAKKYGSVMYLKVGSHGLAIASTPDAAKAFLKTLDLNFSNRPPNAGATHLAYNAQDMVFAHYGPKWKLLRKLSNLHMLGGKALENWADVRKTELGYMLKAMFESSQNNEPVMISEMLTYAMANMLSQVILSRRVFNKKGAKSNEFKDMVVELMTSAGYFNIGDFIPSIGWMDLQGIEGGM 247          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.067e-17
Identity = 53/224 (23.66%), Postives = 115/224 (51.34%), Query Frame = 1
Query:   61 IIWLLFTCVFVMALSSF---SRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD 723
            + +LL + +FV+ +  F    RG+K+          +IGNL +LG  PH+SL  L+  YGP++ L  G V  +VVSSA +A+ +L+ HD  F +R          +++  +   P    W+ ++ +C LH+F+ + + + +E+R ++I  ++  + ++      +++S+++ + + +++           +T    FK+ +  +   +G  ++  + P L  +D
Sbjct:    4 MFFLLCSIIFVVTIIIFRKQKRGKKRNTLPSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKS--ISLPVNLSKILVSLTNDVICKVALGRKYGGET---DFKELMERLNKLLGTFSVGSYVPWLAWID 222          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C75A6_CAMME (Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.393e-17
Identity = 63/211 (29.86%), Postives = 103/211 (48.82%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL---------------ADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +IG L  LG  PH SLA++A  YGPI+ LKLG   TVV S+   A+  L+ HD++F NR +        +N   MV       WK LRKLC+LH+   + L+    ++  ++ ++L  + E  ++ K++ +  VV       ++N I  + L               +   +  +F+  V  ++   G  N+ D  P +  +DLQGI+  M
Sbjct:   47 IIGALPLLGTMPHVSLADMAVKYGPIMYLKLGSKGTVVASNPKAARAFLKTHDANFSNRPIDGGPTYLAYNAQDMVFAEYGPKWKLLRKLCSLHMLGPKALEDWAHVKVSEVGHMLKEMYE--QSSKSVPVPVVVPEMLTYAMANMIGRIILSRRPFVITSKLDSSASASASVSEFQYMVMELMRMAGLFNIGDFIPYIAWMDLQGIQRDM 255          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71AD_ARATH1.489e-1925.64Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH3.317e-1923.56Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71DB_LOTJA4.332e-1928.08Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71AG_ARATH4.332e-1924.46Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71AC_ARATH1.260e-1824.37Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN2.808e-1829.44Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71AO_ARATH2.808e-1826.72Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C75A4_GENTR3.667e-1830.30Flavonoid 3',5'-hydroxylase OS=Gentiana triflora G... [more]
C71AQ_ARATH1.067e-1723.66Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C75A6_CAMME1.393e-1729.86Flavonoid 3',5'-hydroxylase OS=Campanula medium GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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