CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.054e-17
Identity = 59/238 (24.79%), Postives = 114/238 (47.90%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSR--GRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            M+M   +   L T + ++ L  F +   +K           VIGNL +L   PH+SL  L+  YGP++ L  G V  +VVSS+  A  IL+ HD  F NR    A+    +    +V  P    W+ ++ +C L++ T + + + +++R +++  ++  +E+   +  A ++S++    + ++ S         +D T    K  V  I+  + +  + D+ P L  +D + G  S++
Sbjct:    1 MEMTLMVSLCLTTLLTLLLLKKFLKRTAKKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDETAGGLKKRVRQIMELLREFPIGDYVPALAWIDRINGFNSKI 238          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 51/204 (25.00%), Postives = 107/204 (52.45%), Query Frame = 1
Query:   61 IIWLLFTCVF--VMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSIL 666
            +I LL++ +F  ++ L     G+K           +IGNL +LG   H+SL +L++ YGP++ L LG V  ++VSSA MA+ IL+ HD +F NR          +N   +   P    W+ ++ +C +H+ + + + + +++R ++I  +++ + ++  +    ++S+V+   + +++           +T  +K  D +S +L
Sbjct:    4 MIILLWSIIFMTILFLKKQLSGKKGKTPPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKS--SSLPFNVSKVLECLTNDVICRVALGRKYGGETDFKKLTDRLSELL 205          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.541e-16
Identity = 51/225 (22.67%), Postives = 115/225 (51.11%), Query Frame = 1
Query:   49 MLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD 723
            M+  I+  L   + ++      +G+K           +IGNL +LG  PH+SL  L+  YGP++ L+ G V  +VVSSA +A+ IL+ +D  F +R          +    + + P    W+ ++ +C LH+ T + + + + +R+++I  ++  ++++  +   +++S+++ + + +++S        +D+T    FK+ +  +   +G+  +  + P L  +D
Sbjct:    4 MIRIILLSLIIFITILFFIKQKKGKKSNTPASPPRLPLIGNLHQLGRHPHRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKS--SSLQVNLSELLGSLTNDVISRVALGRKYSDET---DFKELMKRLTKLLGEFCVGTYVPWLAWID 223          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16
Identity = 60/220 (27.27%), Postives = 103/220 (46.82%), Query Frame = 1
Query:  100 LSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKP----NLSDHFPLLKRLDLQGIRSRM 747
            +S  +R R+           +IGN+L + +  H+ LA LAK YG +  L++G +    VSS  +A+ +LQ  DS F NR    AI    ++   M        W+ +RK+C + +F+ ++ ++   +R +  K + S    +C  GK I++ + +F  + N+     F       +   K +D    IL E  K     N++D  P    +D QGI  R+
Sbjct:   29 ISFITRRRRPPYPPGPRGWPIIGNMLMMDQLTHRGLANLAKKYGGLCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEVDKMVRSV---SCNVGKPINVGEQIFALTRNITYRAAFG------SACEKGQDEFIRILQEFSKLFGAFNVADFIPYFGWIDPQGINKRL 239          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.483e-16
Identity = 56/196 (28.57%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +IG++  LG   H+S   L+  YGP+ SL  G V  VV S+   AK +LQ ++ +F  R+   A+    + E  +   P    W+ ++KL    +  ++ ++  Q LR ++   LL  +    RA +A++I++      L  L+N + S+ +  +  E   +D V  +    G+ N+SD   L K++DLQG   R+
Sbjct:   42 IIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELAFNCRIESTAVKKLTY-ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITE-----ELLKLTNNVISIMMVGEAEEA--RDVVRDVTEIFGEFNVSDFIWLFKKMDLQGFGKRI 229          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.483e-16
Identity = 65/230 (28.26%), Postives = 106/230 (46.09%), Query Frame = 1
Query:   70 LLFTCV---FVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSN-TIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +L  CV    V A   + + RKK          +IG+L  +   PH+   +L+  +GPI+ L LG V  VV S+A  AK  L+ H+ +F NR  ++         FG    P   + K ++KLC   +   + LD    +R+++ K  +  V +   AG+A+D        S N++S  T+      D+    + +  V+ +   +G  N+SD    LK  DLQG   R+
Sbjct:    5 VLVICVVSSIVFAYIVWRKERKKKLPPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVQFLTYVFG----PYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKGIAGEAVDFGGEFMRLSNNIISRMTMNQTSSEDEKQAEEMRMLVADVAELMGTFNVSDFIWFLKPFDLQGFNKRI 230          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16
Identity = 55/192 (28.65%), Postives = 96/192 (50.00%), Query Frame = 1
Query:  160 VIGNLLELG---EKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            +IGNL +L      P ++L +L + YGP++ L+LGE++T+VVSS  MA  +++ HD  F  R    A     +    +   P    W+ +RK+C L + + +++ +   +R+ + K L+  +  +  AG  ID+S  +F+     +S   F  +  D   + +F   V   +   G   + D FP LK L L
Sbjct:   42 IIGNLHQLALAASLPDQALQKLVRKYGPLMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSS--AGSPIDLSGKLFSLLGTTVSRAAFGKENDD---QDEFMSLVRKAITMTGGFEVDDMFPSLKPLHL 228          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.986e-16
Identity = 50/225 (22.22%), Postives = 114/225 (50.67%), Query Frame = 1
Query:   49 MLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD 723
            M   I+  L   + ++      RG+K           +IGNL +LG  PH+SL  L+  YGP++ L LG V  +VVSSA +A+ IL+ HD  F +R          ++   +   P    W+ ++ +C L + + + + + + +R+++I  ++  ++++  +   +++S+++ + + +++S        + +T     K+ +  +++ +G+ ++  + P L  +D
Sbjct:    4 MTMIILQSLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKS--SSLQVNVSELLGSLTNDVISRIALGRKYSGETDS---KELMKRLMMLMGEFSVGTYVPWLGWID 223          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.304e-15
Identity = 54/191 (28.27%), Postives = 99/191 (51.83%), Query Frame = 1
Query:  160 VIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFG-MVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            ++GN  +L G   H  L +LAK YGP++ LK+GEV+T+V SS  +A+ I + HD  F +R      F     +F  MV+ P    W+ LRK+  + + + + + + + +R +++ N +  +    + G  I++S+ +   SL +   T  +     +    +F   +  +   + +PN++D FP LK L L
Sbjct:   35 ILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSKEI---SLLIYGITTRAAFGEKNKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQL 220          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71C4_MAIZE (Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.906e-15
Identity = 54/193 (27.98%), Postives = 100/193 (51.81%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGP-ILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR---MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            +IG+L  +G+ P+ SLA LA  YGP ++ L+LG V TVVVSS  +A+ +L+ +D  F +R   +V D I    +        P    ++  RKL  +H+    K+ + +  R ++++  L  V     A + +D+S+++ +   NL+   +      ++   R F++        +G  ++ D+FP L R++L
Sbjct:   77 IIGHLHLMGDIPYVSLAALATRYGPDLMLLRLGAVPTVVVSSPRVAEAVLRTYDHVFSSRPRSLVSDII---MYGATDSCFAPYGDHFRKARKLVTVHLLNASKVRSQRPAREEEVRGALDRVRRAAAAREPVDMSELLHSFVNNLVCRAVSGKFSMEEGRNRLFRELTDINAGLLGGFHIQDYFPRLGRIEL 266          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71AI_ARATH4.054e-1724.79Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH9.032e-1725.00Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71AM_ARATH1.541e-1622.67Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]
C84A1_ARATH2.012e-1627.27Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C93B1_GLYEC4.483e-1628.57Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C93A2_SOYBN4.483e-1628.26Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C71D8_SOYBN7.646e-1628.65Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71AL_ARATH9.986e-1622.22Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO1.304e-1528.27Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71C4_MAIZE2.906e-1527.98Cytochrome P450 71C4 OS=Zea mays GN=CYP71C4 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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