CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 82.4185 bits (202), Expect = 2.906e-15
Identity = 57/237 (24.05%), Postives = 106/237 (44.73%), Query Frame = 1
Query:   40 KMDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            +M ++S  +  L   +F+  L       K           VIGNL +LG  PH+ L  L+  YGP++ L  G V  +VVS   +   I++ HD  F NR    AI         ++  P    WK+++ L  +H+   + + + + LR ++IK +   +EE   +  ++++S+++   + +++          ++      K+ V +     GK    D  P L  +D + GI  +M
Sbjct:    2 EMILISLCLTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGGRDIIFGPYGEDWKSMKSLGVVHLLNNKMVRSFENLREEEIKVMTEKLEEASSSSSSVNLSKLLMTLTNDIICRITLGRKYNEEEGGIDIKNLVMTSSEFFGKFFFGDFIPSLAWIDWISGIDDKM 238          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.906e-15
Identity = 49/196 (25.00%), Postives = 101/196 (51.53%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSR 744
            VIGNL +L   PH+SL  L+  YGP++ L  G V  +VVSS+ +A  +++ HD    NR     I    +    +V  P    W+ ++ +C +H+   + + +  ++R ++   ++  VE+       +++S+++   + ++ S   F    +++ +   FK+ V  I   +G   +S++ P L  +D ++G+ +R
Sbjct:   41 VIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFGKKHSNEASMSDFKNQVRKITELVGGFPVSEYIPCLAWIDQIRGLYNR 236          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.956e-15
Identity = 49/203 (24.14%), Postives = 105/203 (51.72%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKS----LAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL---ADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            ++G+L +L  K        ++ +A+ YGP++ LK G  +++  S+   A  +LQ +D     R          H ++ ++    ++ WK  RK+ +  IF+ + L A ++ R +   NL++++    + G  +++   +F  +LN+L + +FS D+   +D + E      +  +L+  G  +++ +FP+L R DL G++ +M
Sbjct:   37 IVGHLPDLISKNSPPFLDYMSNIAQKYGPLIHLKFGLHSSIFASTKEAAMEVLQTNDKVLSGRQPLPCFRIKPHIDYSILWSDSNSYWKKGRKILHTEIFSQKMLQAQEKNRERVAGNLVNFI--MTKVGDVVELRSWLFGCALNVLGHVVFSKDVFEYSDQSDEVGMDKLIHGMLMTGGDFDVASYFPVLARFDLHGLKRKM 237          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.956e-15
Identity = 47/193 (24.35%), Postives = 98/193 (50.78%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGI 735
            VIGNL +L   PH+SL  L+  YGP++ L  G V  +VVSS+ +A  +++ HD    NR     +    +    MV  P    W+ ++ +C +++   +K+ + +++R ++I  ++  VE+       +++S+++   + ++ S        + + +   FK  +  I   +G   + ++ P L  +D L+G+
Sbjct:   42 VIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLGRKYSKEESMSDFKIQMRKITELVGGFPVGEYIPCLAWIDKLRGV 234          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.956e-15
Identity = 58/223 (26.01%), Postives = 102/223 (45.74%), Query Frame = 1
Query:   61 IIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS-VDLADDTTERK----FKDTVSSILVEIGKPNLSDHFPLLK 714
            I+ LLF  + +    + S+ +            +IGNL +LG  PH+SL +L++ YGP++ L LG    +V SS   A+ IL+ HD  +  R          +    +   P    W  +R +  LH+ + +++ + +++R ++  N++  + + C      D S +     L  L+N I S V L     ER+     KD +   L  +   N+ D+ P LK
Sbjct:   12 ILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATRPKYSIADSLLYGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGC------DASVINLGEHLCFLTNNITSRVALGRTYDERESGIDAKDILEQFLQLLDTFNVGDYIPWLK 228          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15
Identity = 58/205 (28.29%), Postives = 106/205 (51.71%), Query Frame = 1
Query:  160 VIGNLLELGE-KPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEF------GMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTE-RKFKDTVSSILVEIGKPNLSDHFPLLKRL-DLQGIRSRM 747
            VIGNLL+L +  P +  A  AK YGPILS ++G  T VV+SSA +AK +L+  D +F +R       PH+ +EF       M +   +  ++ +RK+   H+F+  ++   + +R ++ + ++  + +     + +DIS+++   + +++    F     +D  E ++F   +      +GK   SD FP    L DL G+ + M
Sbjct:   39 VIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRP------PHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYM 237          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BM_ARATH (Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=CYP71B22 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15
Identity = 48/186 (25.81%), Postives = 95/186 (51.08%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFP 705
            +IGNL +LG+  H+S  +L++ YGP++ L  G V  VVVS+   A+ +L+ HD     R  +    +F + + + G         W+ +RKL  L +F+++KL A + +R ++ + L++ + ++      +D+ + +F+ + +++    F  +    D     K +D V      +G    +D FP
Sbjct:   37 IIGNLHQLGKSLHRSFHKLSQNYGPVMFLHFGVVPVVVVSTREAAEEVLKTHDLETCTRPKLTATKLFSYNYKDIGFA--QYGDDWREMRKLAMLELFSSKKLKAFRYIREEESEVLVNKLSKSAETRTMVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEDLVLESETNLGSFAFTDFFP 220          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-14
Identity = 53/208 (25.48%), Postives = 104/208 (50.00%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENC--RAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFP---LLKRLDLQGIRSRMTFY 756
            +IGNL +LG+  +KS  ++++ YGP++ L+LG V  +VVSS   A+ +L+ HD     R       +F +   + G    P    W+ +RK+  L +F+ +KL + + +R ++ + L+  + ++       ++D+ +V+F+ + +++    F  +    D     K ++ V      +G    +D FP   L+ R+  Q  R    FY
Sbjct:   37 IIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFA--PFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDMEKVEELVLESEANLGTFAFADFFPGGWLIDRISGQHSRVNKAFY 242          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.442e-14
Identity = 50/191 (26.18%), Postives = 90/191 (47.12%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL 615
            M +  C + LL   +  +  +  S+  K           +IGNL  L   PHK L  L KI+GP++ L+LG V  VV+SS   A+ +L+ HD    +R    A     +N   +   P    W+ LRKL  + +F+ +K ++ + +R ++   L+  + E       +++ + +F  S +++    F  +L
Sbjct:    1 MSIFLCFLLLLLLLLVTIIFTRKSQSSKLKLPPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFGQNL 191          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 47/180 (26.11%), Postives = 93/180 (51.67%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQ-VVFNTS 576
            M ++S  +++ F  +           + K           IG++  L G +PH+ L +LAK YGP++ L+LGEV+ VVV+S  MAK +L+ HD +F +R    A+    ++   +   P    WK +RK+C   + + + + +   +R  ++  L+  ++ +  +G+ ++  + V++ TS
Sbjct:    1 MQLISIFLFICFLFLLRKWKKYSKNSQTKKLPPGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSSGELVNFKERVIWFTS 180          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71AR_ARATH2.906e-1524.05Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH2.906e-1525.00Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST4.956e-1524.14Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71AE_ARATH4.956e-1524.35Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME4.956e-1526.01Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C83A1_ARATH8.454e-1528.29Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BM_ARATH8.454e-1525.81Cytochrome P450 71B22 OS=Arabidopsis thaliana GN=C... [more]
C71BZ_ARATH1.104e-1425.48Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.442e-1426.18Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH2.460e-1426.11Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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