CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.460e-14
Identity = 63/236 (26.69%), Postives = 117/236 (49.58%), Query Frame = 1
Query:   70 LLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVI--LPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL-------ADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            LLFT   V  L   +  +++           IGNL +LG  PH+SL  L+  +GP++ L+LG + T+VVSSA MA+ I ++HDS F  R    +++      +G  +   P    W+ +RK+  L + + +++ + + +R +++K LL  +     +   +++S++    +L+L +N +  + L       ADD    K  + +      +G     D FP L  L+   G+ +R+
Sbjct:   12 LLFTLSLVKQLRKPTAEKRRLLPPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGR---PSLYAANRLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTI---ALSHGPVNLSEL----TLSLTNNIVCRIALGKRNRSGADDA--NKVSEMLKETQAMLGGFFPVDFFPRLGWLNKFSGLENRL 235          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 58/221 (26.24%), Postives = 98/221 (44.34%), Query Frame = 1
Query:   76 FTCVFVMALSSFSRGRKKXXXXXXXXXX------VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFPL 708
            F CVF++   S     KK                VIGNL ++GE PH+SL  LA+ YGP++ L  G V   VVSS   A+ +L+ HD    +R  +V   +      + G    P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D+S+ +F  + ++L       +   +D   + K ++ V      +     SD FP+
Sbjct:    5 FLCVFLITFVSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRDFKDIGFT--PYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVDRSPVDLSKSLFWLTASILFRVALGQNFHESDFIDKEKIEELVFEAETALASFTCSDFFPV 223          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.213e-14
Identity = 45/183 (24.59%), Postives = 94/183 (51.37%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERK-FKDTVSSILVEIGKPNLSDHFP 705
            ++GN+ +LG  PH+SL +L+  YGP++++ LG V TVVV S   A+ +L+ HDS    R          ++  G+        ++++RKLC L +F+ ++ ++ + +R +++  L++   ++  +G ++D++  +     +      F +       + + F +  +     IGK   +D FP
Sbjct:   45 ILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTRPKLSITKSFFYDGLGLGFTKWGDYYRDVRKLCVLELFSVKRANSFRNIREEELSRLVNSFSDSASSGSSVDLTANLAKFVASFTCRMAFGLSFQGSGMDNETFLELFTEANRVIGKFAAADIFP 227          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.196e-14
Identity = 49/233 (21.03%), Postives = 114/233 (48.93%), Query Frame = 1
Query:   61 IIWLLFTCVFVMALSSFSRGR---KKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            I++L    +F++ +  F + +   K           +IGNL +L + PH+SL  L+  YGP++ L  G V  +V S+A  A+ +L+ HD  F +R          +    M   P    W+ ++ +  LH+ + + + + Q++R+++I  ++  + ++  + K +++S+++ + + +++            T    FK+ +  ++ ++G   +  + P L   D + G+ +R+
Sbjct:    2 ILFLCLIILFIITILFFKKHKTVNKIINFPSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKS--SSKPVNLSKILSSLTNDVICRVALGRKYGVGT---DFKELIDRLMRQLGTFTIGSYVPWLAWTDWVSGLEARL 229          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.480e-14
Identity = 48/186 (25.81%), Postives = 93/186 (50.00%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFP 705
            +IGNL +LG+  H+S  +L++ YGP++ L+ G V  VV S+   A+ +L+ HD     R  +    +F +   + G         W+ +RKL  L +F+++KL A + +R ++ + L+  V E+ +    +D+ + +F+ + +++    F  +    D     K ++ V      +G     D FP
Sbjct:   37 IIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFA--QYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFGQNFHECDFVDMDKVEELVLESETNLGSFAFIDFFP 220          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.157e-14
Identity = 53/227 (23.35%), Postives = 108/227 (47.58%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRL 720
            M ++S  +++ F  +        +  + K           IG +  L G  PH+ L +LA+ YGP++ L+LGEV+ VVV+S  MAK +L+ HD +F +R    A+    +N   +   P    W+ +RK+C + + + + + +   +R  ++  L+  ++    +G+ ++ ++ +   + ++   + F   L +     K    V S+       +++D FP  K L
Sbjct:    1 MQLVSIFLFISFLFLLRKWKKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQEVFIKLIREVISLAEGF---DVADIFPSYKFL 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14
Identity = 49/184 (26.63%), Postives = 91/184 (49.46%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADD--TTERKFKDTVSSILVEIGKPNLSDHFP 705
            ++GNL  LG  PHK+L ELA+ YGP++ L+LG V TVVVSSA  A+ +L+ HD    +R          ++   +   P    W+ +RKL  L + + +++ A    R +++  L++ ++    +  +I ++  VF  +  ++    F    A      + +F+  +   +  +   +  D FP
Sbjct:   64 ILGNLHLLGPLPHKNLRELARRYGPVMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQFAHKERFQHVLDDAMDMMASFSAEDFFP 247          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.347e-14
Identity = 48/202 (23.76%), Postives = 103/202 (50.99%), Query Frame = 1
Query:  160 VIGNLLEL-GEKP-HKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPH--QHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENC--RAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +IGN+ ++ G  P H  L  LA  YGP++ LKLGEV+ ++V+S  MA+ I++ HD +F +R   D +      +N  G+V       W+ LRK+C + + T +++ + + +R +++  L+  +        G   +++Q +++ +  + +   F         ++ F   +   L+ +G  +++D +P  +   + G   ++
Sbjct:   52 LIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDR--PDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFG---KKSRYQQVFISNMHKQLMLLGGFSVADLYPSSRVFQMMGATGKL 248          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 50/185 (27.03%), Postives = 95/185 (51.35%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVE---IGKPNLSDHFP 705
            +IGNL +L    H+ L +L+K +GP+L L+LG +  VV+SS   A+ +L+ HD     R   +A      +   +   P     + LRKL  ++ F+TQK+ + + +R ++   ++  ++E+ +    +D+SQ +F    +++    F   L  D  +   K+ +  ++ E   +G  + SD FP
Sbjct:   38 IIGNLHQLRGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFGQRL--DQNKHVNKEKIEELMFEVQKVGSLSSSDIFP 220          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKF--KDTVSSILVE----IGKPNLSDHFPL 708
            VIGNL ++GE PH+SL  LA+ YGP++ L  G V   VVSS   A+ +L+ HD    +R           N   +   P    WK  RK     +F  +K+ + + +R ++   L+  + E+      +D+S+ +F     L ++  F V L  +  E  F  K+ +  ++ E    +     SD FP+
Sbjct:   39 VIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSRPKLVGTRLLSRNFKDVCFTPYGNEWKARRKFALRELFCLKKVQSFRHIREEECNFLVKQLSESAVNRSPVDLSKSLF----WLTASIFFRVALGQNFHESNFIDKEKIEELVFEAETALASFTCSDFFPV 223          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71A9_SOYBN2.460e-1426.69Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C71BJ_ARATH3.213e-1426.24Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH3.213e-1424.59Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71AN_ARATH4.196e-1421.03Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH5.480e-1425.81Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71D7_SOLCH7.157e-1423.35Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71E1_SORBI9.347e-1426.634-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71DA_SOYBN9.347e-1423.76Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71B3_ARATH1.594e-1327.03Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71BK_ARATH2.082e-1328.57Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
back to top