CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 48/196 (24.49%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDA--IFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADD 624
            + +LS  + LL    F++  +   +  K+          +IGNL +L    HK L +L+K +GP++ L+LG    VV+SS+  A+  L+ HD    +R +  A  +F     + G  +      W+ LRKL     F+ +K+ + + +R ++   ++  ++E       +D+S+++F  + +++  T F     D+
Sbjct:    2 VSLLSFFLLLLVPIFFLLIFTKKIKESKQNLPPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGV--YGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFFDN 195          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13
Identity = 41/185 (22.16%), Postives = 92/185 (49.73%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLK 714
            +IGNL +LG  PH+SL +L++ YGP++ L  G    +V SS   A+ I++ HD  + +R     +    +    +   P    W+  + +  LH+ +  ++ + + +R ++  N++  + + C +   I++ + + + + N++S    ++    D  E   +  +   +  +G  N+ D+ P L+
Sbjct:   46 IIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDS-SVINLGEHLCSLTNNIISRV--ALGRTYDEKESGIEHIIEQFVELLGIFNVGDYIPRLE 227          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 48/190 (25.26%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  160 VIGNL-LELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            +IG+L L  G+ P  +LA +AK YGP+  ++LGEV +VV+SS    K  ++  D +  +R          ++   ++  P S  W+ +RK+C   + + + + +   +R+ ++  LL ++  +  AG+A+D+++ +   + +++    F   + D     +  + V   L       L+D FP  K L+L
Sbjct:   44 LIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADRFESIGTKIMWYDNDDIIFSPYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRD---HEELVELVKDALSMASGFELADMFPSSKLLNL 230          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 58/227 (25.55%), Postives = 106/227 (46.70%), Query Frame = 1
Query:   79 TCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            T   ++AL +     KK          ++G LL L   +P  +L +LA  YGP++ L+ G+V TVV+SS   A+ +L+D D +F +R  ++   IF + + + G    P    W+ LRKLC + + +T+ +     +R  +   L+  +E      K   ++ ++ + +    +   F      +  E +F   +   L         D FP L+ +D + G+RSR+
Sbjct:   17 TLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASRPSLLVSEIFCYGNLDIGFA--PYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNIEAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQE-QFLTALDEALKFSNGFCFGDLFPSLRFIDAMTGLRSRL 240          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 53/164 (32.32%), Postives = 80/164 (48.78%), Query Frame = 1
Query:   73 LFTCVFVMALSSFSR-----GRKKXXXXXXXXXXVIGNLLELG-EKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR---MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAG 537
            L + V +   S  SR     G KK          +IGNLL L   +PH +L +LA  +GP++ L+LG+V  VV+SS   A+ +L+D D++F +R   +V D I    +    M   P    W+ LRKLC   +  T K+     +R  +  +L+  V     AG
Sbjct:    2 LISAVILAVCSLISRRKPSPGSKKKRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASRPSLLVADIIL---YGSMDMSFAPYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAG 162          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 49/189 (25.93%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKF---KDTVSSILVE----IGKPNLSDHFP 705
            +IGNL  L   PH+   +L+  YGP++ L+LG V  VV+SS+  A+ +L+ +D    +R          +    +   P    W+ +RKL  + +F+++K+ + + +R +++  ++  V E+      +D+S+  F    +L ++ I  V L  +  E  F   +D +  ++ E    +G    SD FP
Sbjct:   40 IIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSRPKTVGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFF----SLTASIICRVALGQNFNESGFVIDQDRIEELVTESAEALGTFTFSDFFP 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.913e-13
Identity = 50/182 (27.47%), Postives = 84/182 (46.15%), Query Frame = 1
Query:   61 IIWLLFTCVFVMALSSFSRGRK-KXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIF 603
            +I LL T  F+  L  + R    K          V+GNL +LG  PH+SL  L++ YGP++ L  G V  +V SS   A+ I+++ D +F NR          ++   +   P    W+ +R +C L + + +++   Q  RR + +     VE+  +  K    + V     L  L+N +F
Sbjct:    2 LIALLCTLPFLFFLKKWRRSYSGKTPPPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNRPNLSIPRRLLYDNHDVAFAPYGEYWRQIRSICVLQLLSNKRV---QSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVF 180          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12
Identity = 50/199 (25.13%), Postives = 99/199 (49.75%), Query Frame = 1
Query:  160 VIGNLLEL--GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            +IGN+  L     PH  L +L+  YG ++ LKLGEV+T+VVSS   AK +++ HD  F +R    A     ++  G+   P    W+ LRK+  L + +++++ + Q +R + + + +  +      G  +++++ V +T   + + T      +     +K    V+      G  +L D +P +K L  + G++ ++
Sbjct:   44 IIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMA--TIEGSQVNVTKEVISTVFTITARTALG---SKSRHHQKLISVVTEAAKISGGFDLGDLYPSVKFLQHMSGLKPKL 237          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12
Identity = 42/193 (21.76%), Postives = 95/193 (49.22%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGP--ILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRA--GKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            +IG+L  +G  PH S  +L   YG   ++ +++G V T+VVS+   A+ +L+ HD    +R         ++N   +   P    W+  RK+ N H+ + + + + +  R ++++ +++ + +   A  G A+D+++++   + + +   +           + F++   +    +G  N+ D+FP L  +DL
Sbjct:   65 IIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASRPRNPVADIIRYNSTDVAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAVLGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLADVDL 257          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C99A2_ORYSJ (Cytochrome P450 99A2 OS=Oryza sativa subsp. japonica GN=CYP99A2 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 61/235 (25.96%), Postives = 112/235 (47.66%), Query Frame = 1
Query:   73 LFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLEL-GEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKK----IKNLLSYVEENCRAG--KAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            L T   ++AL +     KK          ++G LL L    P  +L ELA  YGP++ L++G++ TVVVSS   A+ +L+D D  F +R  ++   IF + + + G    P    W+ LRKLC + + +T+ +     +R  +    ++N+ +    +   G  K + +++++   +  + +   F      +  E +F   +   L   G     D FP L+ +D + G+RSR+
Sbjct:   39 LLTLPILLALLTRKSSSKKRRPPGPWNLPLVGGLLHLLRSHPQVALRELASKYGPVMFLRMGQIDTVVVSSPAAAQEVLRDKDVMFASRPSLLVSEIFCYDNLDVGFA--PYGAYWRMLRKLCTVELLSTKVVRQLAPVRNDETLTLVRNIKAASSGHGGGGGKKPVTLARLLTTCTNTITAKAAFGQACGVELQE-QFLTALDVGLKFSGGFCFGDLFPSLRFIDAMTGLRSRL 270          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71B4_ARATH2.082e-1324.49Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71A2_SOLME4.639e-1322.16Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71DD_MENPI6.059e-1325.26Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C99A3_ORYSJ7.913e-1325.55Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A1_SORBI7.913e-1332.32Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71B2_ARATH7.913e-1325.93Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71A6_NEPRA7.913e-1327.47Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71D9_SOYBN1.763e-1225.13Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71C1_MAIZE2.302e-1221.76Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C99A2_ORYSJ3.007e-1225.96Cytochrome P450 99A2 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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