CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 46/194 (23.71%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENC----RAGKAIDISQVVFNTSLNLLSNTIF-----SVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLK 714
            ++GNL ++     +   E A+ YGPI+S+ +G +  VVVSSA +AK +L++HD    +R    +      N   ++       +  +RK+C L +FT ++L++ + +R  ++  ++  V  +C       K + + + +   + N ++   F     + +   D    +FK  VS+ L      ++++H P L+
Sbjct:   36 IVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNGQDLIWADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPENRAKGLQLRKYLGAVAFNNITRLAFGKRFMNAEGVVDEQGLEFKAIVSNGLKLGASLSIAEHIPWLR 229          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 59/246 (23.98%), Postives = 110/246 (44.72%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRK-KXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYN--RMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKA-IDIS----QVVFNTSLNLLSNTIF---SVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            M++LS + + +F        +   R RK K          +IGNL  L    H++   L++ YG + SL  G    VVVSSA   +     +D    N  R +      + +   G         W+NLR++  L + +  ++++   +RR + + L++ + ++     A +++S     + FN  + ++S   +     D +D     +F+D VS +L   G  N +D  PLL+ LD + +  R+
Sbjct:    1 MEILSLLSYSVFYLALFFIFNIVIRARKFKNLPPGPPSLPIIGNLHHLKRPLHRTFKGLSEKYGHVFSLWFGSRLVVVVSSASEFQQCFTKNDVVLANRPRFLSGKYIFYNYTTLGST--SYGEHWRNLRRITALDVLSNHRINSFSGIRRDETQRLITRLADDSSTNFAEMELSSRLYDMTFNNIMRMISGKRYYGEDCDTSDLQEASQFRDMVSELLQLSGANNKTDFMPLLRFLDFENLEKRL 244          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 44/186 (23.66%), Postives = 90/186 (48.39%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENC--RAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFP 705
            +IGNL + G   HKSL ++++ YGP++ L  G V  ++VSS   A+ +L+ HD    +R   V   +F +   + G    P    W+ +RK+    +F+ +KL + + +R  + + L+  V ++       ++++ +V+F  + +++    F  +  D       ++ V      +G    +D  P
Sbjct:   37 IIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFA--PYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCDFVDMETVEELVLESETNLGSLAFADFLP 220          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.699e-12
Identity = 47/190 (24.74%), Postives = 93/190 (48.95%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR----MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEE-NCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLK 714
            +IGNL +LG  PH+SL +L+K YGP++ L LG    +V SS    + I++ +D  + NR    M    I+  +   F     P    W+ +R +  LH+ + +++ + +  R ++  N++  +++ +  +  A D+  +    + N+++         D   E   K T+   +  +G  N+ D+ P L+
Sbjct:   34 IIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFS----PHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALGKKYND---EIDAKATLDKFVELLGTFNVGDYIPCLE 216          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS--VDLADDTTERKFKDTVSSILVEIGKPNLSDHFP 705
            VIGNL +L    HK L +L+K +GP+L L+LG +  VV+SS   A+  L+ HD     R + +       +   + + P   + + LRKL  L  F+T K+ + + +R ++   ++  ++E      ++D+SQ +F    +++  + F    D  +     K +D +  +  ++G  + SD FP
Sbjct:   35 VIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAPYGESLRELRKLSFLKFFSTTKVRSFRYIREEENDLMVKKLKEAALKKSSVDLSQTLFGLVGSIIFRSAFGQRFDEGNHVNAEKIEDLMFEV-QKLGALSNSDLFP 217          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.492e-11
Identity = 56/240 (23.33%), Postives = 115/240 (47.92%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGE-KPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTE-RKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            MD+L  I  L+    F    S+  +  +           +IGNL ++ +  P   L  L+K+YGPI ++K+G     V+SSA +AK +L+  D +F  R  +       +Q  E G      +  ++ +RK+C +++F+  ++ + + +R ++ + ++  + +       +D+S+++ + +  ++    F     +  TE ++F D +      +G    SD FP    LD L G+ +R+
Sbjct:    1 MDLLLIIAGLVAAAAFFFLRSTTKKSLR--LPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFG--QYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARL 236          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11
Identity = 49/190 (25.79%), Postives = 96/190 (50.53%), Query Frame = 1
Query:  160 VIGNL-LELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            +IG+L L  G+ P  +LA +AK YGP+  ++LGEV +VV+SS    K  ++  D +  NR          ++   ++  P S  W+ +RK+C   + +++ + +   +R+ ++  LL ++  +  AG A+D+++ +   + +++    F   + D+    +    V   L       L+D FP  K L+L
Sbjct:   44 LIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANRFESIGTRIMWYDNEDIIFSPYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFGSVIRDNA---ELVGLVKDALSMASGFELADMFPSSKLLNL 228          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.545e-11
Identity = 49/207 (23.67%), Postives = 96/207 (46.38%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNR--MVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFP-----LLKRLDLQGIRSRMTF 753
            +IGNL +LG   H SL +L+  +GP++ ++ G V   V SS   AK +L+ HD    NR  +V + +F H + + G         W+ ++K   L +F+ +K  + + +R ++   L+  +    +    +D+ + +F+ + +++    F  +    D     K ++ V      +     +D FP     L+ R+  Q  R  + F
Sbjct:   37 LIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNRPKLVANGLFTHGYKDIGFT--QYGEEWREMKKFVGLELFSPKKHKSFRYIREEEGDLLVKKISNYAQTQTLVDLRKSLFSYTASIIFREAFGQNFRECDYINMDKLEELVQETETNVCSLAFTDFFPRGLGWLVDRISGQHSRMNIAF 241          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C82A4_SOYBN (Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11
Identity = 61/252 (24.21%), Postives = 111/252 (44.05%), Query Frame = 1
Query:   28 LSLTKMDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNL-LELGEK-PHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGK------AIDI----SQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            L+ T + ++S I  L   C+F+        G  K          + G+L L +G K PHK+L  LA+ +GP+ ++KLG    +VVS   MA+     +D +   R          +N   +++ P    W+ LRK+    I ++ +++  Q++R  +++N +  + +  R+ K      ++++    +Q +FN  L ++    F    A D    K    V   +   G   + D  P L+ LD  G    M
Sbjct:    8 LNTTTIGVVSLIFLL---CLFLYGPLKKVHGSSKEAPTVGGAWPIFGHLPLLIGSKSPHKALGALAEKHGPLFTIKLGAKKALVVSDWEMARECFTTNDVAVSARPKLLVAELMCYNNAMLLVAPYGPYWRELRKIIVTEILSSSRVEQLQDVRVSEVQNSIVELYDVWRSQKNESDYASVELKQWFAQPIFNMVLRMVVGKRFLSATATDEKAEKCVKAVDEFMRLAGVFTVGDAIPYLRWLDFGGYEKAM 256          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C82A3_SOYBN (Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11
Identity = 57/247 (23.08%), Postives = 109/247 (44.13%), Query Frame = 1
Query:   52 LSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNL--LELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELR----RKKIKNLL---SYVEENCRAGKAIDISQVVFNTSLNLLSNTIFS------VDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            ++ I+ L+F C+F+   +S    R K          ++G+L  L   + PHK L  LA  YGP+ ++KLG    +V+S+  M+K +   +D +  +R    A+    +N+  + + P    W+ LRK+      + ++++    +R    R  IK L    S   +N      +DI Q +   + N++   +        + +      ++F   +   +  +G   ++D  P L+ LDL G    M
Sbjct:   15 IASILSLIFLCLFLYRKNS----RGKDAPVVSGAWPILGHLSLLNGSQTPHKVLGALADKYGPLFTIKLGMKPALVLSNWEMSKELFTTNDLAVSSRPKLVAVEVMSYNQAFVGLAPYGPYWRELRKIVTFEFLSNRRIEQRNHIRVSEVRTSIKELFDIWSNGNKNESRYTLVDIKQWLAYLTFNMVVRMVVGKRYFGVMHVEGKDKAQRFMKNIREFMNLMGTFTVADGVPCLRWLDLGGHEKAM 257          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C98A3_ARATH3.007e-1223.71Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC3.007e-1223.98Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
C71B5_ARATH3.007e-1223.66Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71A3_SOLME6.699e-1224.74Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71BO_ARATH8.749e-1227.17Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH1.492e-1123.33Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71DF_MENPI2.545e-1125.79Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71BU_ARATH2.545e-1123.67Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C82A4_SOYBN3.324e-1124.21Cytochrome P450 82A4 OS=Glycine max GN=CYP82A4 PE=... [more]
C82A3_SOYBN3.324e-1123.08Cytochrome P450 82A3 OS=Glycine max GN=CYP82A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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