CF835838

Overview
NameCF835838
Unique NameCF835838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11
Identity = 48/221 (21.72%), Postives = 103/221 (46.61%), Query Frame = 1
Query:   55 SCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXXVIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKP---NLSDHFPL 708
            S ++ L    +F +  +   +  K+          ++GNL +L    H+ L EL+K +GP++ L+LG V  V++SS+  A+  L+ HD     R   +A      N   + +   S  W+ LRK+     F+ +K+ + + +R ++   ++  + +       +D+S+ +F  + + +   +F    +D+  +   ++ +  ++ E  K      SD FP+
Sbjct:    6 SFLLLLSLPFLFTLIYTKKMKESKRNLPPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFGQSFSDN--KHFSEEKIEELVFEAQKSLTFKFSDLFPI 224          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11
Identity = 43/190 (22.63%), Postives = 88/190 (46.32%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVE--ENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD 723
            VIGNL +L    H+SL  L+  YGP++ L  G    ++VSSA +A  IL+ +D    NR     I         +   P    WK ++ +C  ++ + + + + +++R  +IK ++  VE   +C     +++SQ+    + +++         +        ++ V +    +G+  + ++ P L  +D
Sbjct:   42 VIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSKEDGIDVENIVRAFSALVGEFPIGEYIPSLSWID 231          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 51/231 (22.08%), Postives = 113/231 (48.92%), Query Frame = 1
Query:   40 KMDMLSCIIWLLFTCVFVMALSSFSRGR-KKXXXXXXXXXXVIGNL-LELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            ++ + S II L+ T V  + +  + +   ++          ++G+L L  G+ P  ++A++AK YGP+  ++LGEV +VV+SS    K  ++  D +  +R          ++   ++  P S  W+ +RK+C   + + + + +   +R+ ++  LL +++ +  AG+ +D+++ +   + +++    F   + D     +  + V   L       L+D FP  K L+L
Sbjct:    2 ELQISSAIIILVATFVASLLIKQWRKSESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND---HEELVELVKDSLSMASGFELADLFPSSKLLNL 227          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.671e-11
Identity = 41/199 (20.60%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEE-NCRAGKA-IDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLD-LQGIRSRM 747
            VIGNL +L    H+SL  L+  YGP++ L  G    ++VSSA +A  +++ HD    NR     +         +   P    W+ ++ +C  ++   + + + +++R ++IK ++  +E+ +C +  + +++SQ++   + +++         +        ++ V +    +G+  + ++ P L  +D ++G+  +M
Sbjct:   41 VIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDIICRVALGRKYSGKKDGIDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKM 239          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 48/194 (24.74%), Postives = 93/194 (47.94%), Query Frame = 1
Query:  160 VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRA----GKAI----DISQVVFNTSLNLLSNTIF-SVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLK 714
            V+GNL ++     +  AE A+ YGPI+S+  G    V+VS++ +AK +L++HD    +R    +      +   ++       +  +RK+C L +F+ ++L+A + +R  ++ +++  V  +C +    GK I     +  V FN    L     F + +   D    +FK  V + L       +++H P L+
Sbjct:   37 VVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAKEVLKEHDQLLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLEALRPIREDEVTSMVDSVYNHCTSTENLGKGILLRKHLGVVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVENGLKLGASLAMAEHIPWLR 230          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.406e-11
Identity = 51/231 (22.08%), Postives = 113/231 (48.92%), Query Frame = 1
Query:   40 KMDMLSCIIWLLFTCVFVMALSSFSRGR-KKXXXXXXXXXXVIGNL-LELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDL 726
            ++ + S II L+ T V  + +  + +   ++          ++G+L L  G+ P  ++A++AK YGP+  ++LGEV +VV+SS    K  ++  D +  +R          ++   ++  P S  W+ +RK+C   + + + + +   +R+ ++  LL +++ +  AG+ +D+++ +   + +++    F   + D     +  + V   L       L+D FP  K L+L
Sbjct:    2 ELQISSAIIILVATFVASLLIKQWRKSESQQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND---HEELVELVKDSLSMASGFELADLFPSSKLLNL 227          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 56/212 (26.42%), Postives = 97/212 (45.75%), Query Frame = 1
Query:  160 VIGNL-LELGEK-PHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQ--HNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAID-----------ISQVVFNTSLNLL-SNTIFSVDLADDTTERKFKDTVSSILVEIGKPNLSDHFPLLKRLDLQGIRSRM 747
            +IG+L L LG K PHK+L +LA  YGPI S+K+G    VVVS+  MAK     +D +  +  + D I  +   +N   +V+ P    W+ LRK+      +  +++    +R  ++++ ++ +  + R+ K +             S +VFN  L ++     FS   +DD    +    V   +       + D  P L+  D  G  + M
Sbjct:   46 IIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAVSS--LPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVELKQWFSLLVFNMILRMVCGKRYFSASTSDDEKANRCVKAVDEFVRLAATFTVGDAIPYLRWFDFGGYENDM 255          
BLAST of CF835838 vs. ExPASy Swiss-Prot
Match: C71B7_ARATH (Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 55/226 (24.34%), Postives = 99/226 (43.81%), Query Frame = 1
Query:   43 MDMLSCIIWLLFTCVFVMALSSFSRGRKKXXXXXXXXXX---VIGNLLELGEKPHKSLAELAKIYGPILSLKLGEVTTVVVSSAPMAKYILQDHDSSFYNRMVKDAIFPHQHNEFGMVILPVSTTWKNLRKLCNLHIFTTQKLDANQELRRKKIKNLLSYVEENCRAGKAIDISQVVFNTSLNLLSNTIFSVDL--ADDTTERKFKDTVSSILVEIGKPNLSDHFP 705
            M +L C + LL   VF+++LS  S+  K              +IGNL  L   PH     L++ +GP++ L  G V  VV+SS   A+  L+  D    +R    A     +N   +   P    WK LRKL  + +  T+K  + + +R ++   L+  + E+      +++ + +F    +++    F V++   +   E    D V+   + +     +D FP
Sbjct:    1 MSILLCFLCLL--PVFLVSLSILSKRLKPSKWKLPPGPKTLPIIGNLHNLTGLPHTCFRNLSQKFGPVMLLHFGFVPVVVISSKEGAEEALKTQDLECCSRPETVATRMISYNFKDIGFAPYGEEWKALRKLVVMELLNTKKFQSFRYIREEENDLLIKKLTESALKKSPVNLKKTLFTLVASIVCRLAFGVNIHKCEFVDEDNVADLVNKFEMLVAGVAFTDFFP 224          
The following BLAST results are available for this feature:
BLAST of CF835838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
C71BP_ARATH3.324e-1121.72Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH4.342e-1122.63Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C7D95_MENSP5.671e-1122.08Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C71AK_ARATH5.671e-1120.60Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C98A2_SOYBN7.406e-1124.74Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C7D95_MENGR7.406e-1122.08Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C82A2_SOYBN9.673e-1126.42Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C71B7_ARATH9.673e-1124.34Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01P18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01P18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835838 ID=CF835838; Name=CF835838; organism=Citrus sinensis; type=EST; length=758bp
CAAAAATGGACTGTGTTAAGCTGCATACTATCGCTTACAAAGATGGATAT
GTTAAGCTGCATAATATGGCTTCTATTCACTTGTGTTTTTGTGATGGCTT
TAAGTTCCTTTTCCAGGGGACGCAAAAAGCCGCTGCCACCGGGACCGACA
CCTTATCCGGTGATTGGAAACCTCCTGGAACTCGGTGAAAAACCTCACAA
GTCACTAGCCGAGCTTGCCAAGATTTATGGCCCTATATTGAGCCTAAAAT
TAGGCGAGGTGACCACAGTAGTAGTTTCATCTGCTCCCATGGCCAAATAT
ATCCTGCAAGATCACGATTCATCCTTCTATAATCGAATGGTTAAGGATGC
AATCTTTCCCCACCAACACAATGAATTCGGGATGGTCATCCTGCCTGTCT
CAACAACCTGGAAAAACCTTCGAAAATTATGCAACTTACATATTTTCACT
ACTCAAAAACTCGATGCCAACCAAGAACTCCGGCGTAAGAAAATAAAAAA
TCTTCTTTCCTATGTTGAAGAAAATTGCCGTGCCGGTAAAGCAATAGATA
TTAGCCAAGTTGTTTTCAATACTTCACTTAATTTGTTATCCAACACAATT
TTTTCTGTTGATTTGGCTGATGACACCACTGAACGAAAGTTTAAGGATAC
AGTTTCCAGTATCCTGGTAGAAATAGGAAAGCCTAACTTGTCCGACCATT
TTCCCCTGCTTAAAAGGCTTGACTTGCAGGGGATAAGGAGTCGCATGACA
TTTTATTT
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