CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 3.735e-49
Identity = 98/240 (40.83%), Postives = 149/240 (62.08%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            +EF  +V ++ R++H+N V+LLGYCV+G  R+L Y+F  NG+L   +HG  G     P   L+W  R+ I +G AKGL YLHE  +P ++HRDIKSSN+L+     AK++DF L+      ++ + +TRV+GTFGY APEYA TG LN KSD+YSFG++++E++TGR PVD++ P+G+ +LV W    +   +  + VD ++                  CV  +A+ RP M  ++  L+
Sbjct:  193 KEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVG--DVSP---LTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYV-TTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.371e-49
Identity = 109/244 (44.67%), Postives = 147/244 (60.25%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            ++F+  VS ++ L H N  +L+GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE   P I+ ++IKS+N+L+  +    ++D  L++  P     L+ T      GY APE +M+GQ + KSD+YSFGVV+LELLTGRKP D T  R +QSLV WATP+L + D + + VD  L G YP           ALCVQ E +FRP MS VV+AL  L+
Sbjct:  457 DDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLH-----LSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQTDE----GYSAPEVSMSGQYSLKSDIYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLV 691          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.393e-48
Identity = 111/244 (45.49%), Postives = 146/244 (59.84%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            ++F   VS ++ L HEN  +L GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE   P I+H++IKS+N+L+  +    ++D  L++  P     L+        GY APE +M+GQ + KSDVYSFGVV+LELLTGRKP D T  R +QSLV WATP+L + D + + VD  L G YP           ALCVQ E +FRP MS VV+AL  L+
Sbjct:  460 DDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLH-----LAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIKSANILLDSELNPHLSDSGLASFLPTANELLNQNDE----GYSAPETSMSGQYSLKSDVYSFGVVMLELLTGRKPFDSTRSRSEQSLVRWATPQLHDIDALGKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVVLV 694          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.200e-48
Identity = 110/243 (45.27%), Postives = 151/243 (62.14%), Query Frame = -1
Query:  132 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADP-HIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 854
            E+L +++ + +L H N V+L+GYC++   R+L YEF   GSL + L  R    GA   P L W  RV +A+ AAKGL +LH  +DP  +I+RDIK+SN+L+  D  AK++DF L+   P       STRV+GT+GY APEY  +G LNA+SDVYSFGV+LLE+L+G++ +DH  P  +++LV WA P L S+ KV   VD RL   Y P            C+ +E   RP M  VV+ALQ L
Sbjct:  117 EWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRR----GAYFKP-LPWFLRVNVALDAAKGLAFLH--SDPVKVIYRDIKASNILLDADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQCLSFEPKSRPTMDQVVRALQQL 352          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.677e-47
Identity = 105/241 (43.57%), Postives = 148/241 (61.41%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            +E+LA+V+ + +  H N V+L+GYC++   R+L YEF   GSL + L  R      QP   LSW  R+K+A+GAAKGL +LH  A+  +I+RD K+SN+L+  +  AK++DF L+   P       STR++GT+GY APEY  TG L  KSDVYS+GVVLLE+L+GR+ VD   P G+Q LV WA P L ++ K+ + +D RL   Y              C+ +E   RPNM+ VV  L+
Sbjct:  118 QEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSY--FQP---LSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLE 352          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 3.496e-47
Identity = 108/243 (44.44%), Postives = 155/243 (63.79%), Query Frame = -1
Query:  132 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 854
            E+LA+++ + +L H N V+L+GYC++   R+L YEF + GSL + L  R+G    QP   LSW  RV++A+GAA+GL +LH  A P +I+RD K+SN+L+  +  AK++DF L+   P M    H STRV+GT GY APEY  TG L+ KSDVYSFGVVLLELL+GR+ +D   P G+ +LV WA P L ++ ++ + +D RL G Y              C+  +A  RP M+ +VK ++ L
Sbjct:  118 EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLF-RRGTF-YQP---LSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGP-MGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEEL 353          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.496e-47
Identity = 111/251 (44.22%), Postives = 156/251 (62.15%), Query Frame = -1
Query:  114 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL--LNARPG 857
            +E+LA+V+ + +  H + V+L+GYC++   R+L YEF   GSL + L  R+G+   QP   LSW+ R+K+A+GAAKGL +LH  ++  +I+RD K+SN+L+  +  AK++DF L+   P       STRV+GT GY APEY  TG L  KSDVYSFGVVLLELL+GR+ VD   P G+++LV WA P L ++ K+ + +D RL   Y              C+  E   RPNMS VV  L+ +  LNA  G
Sbjct:  117 QEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF-RRGLY-FQP---LSWKLRLKVALGAAKGLAFLHS-SETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQSLNAAIG 361          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.959e-46
Identity = 106/243 (43.62%), Postives = 146/243 (60.08%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            +FL  V+ + R++H N VQL+G+C + + R+L +E+  NG+LHD+LH    +K       LSW  RV+IA+ AAK LEYLHE  DP  IHR+ KS+N+L+ DD    ++D  L+      A    S ++L  +GY APE+   G    K DVYSFGVV+LELLTGRK  D    RG+Q LV WA P+L + D + + VD  L GDYP           + CVQ E ++RP MS VV+ L  ++
Sbjct:  520 KFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLKIE-----LSWNVRVRIALEAAKALEYLHEICDPPSIHRNFKSANILLDDDIRVHVSDCGLAPLISSGAVSQLSGQLLAAYGYGAPEFEY-GIYTMKCDVYSFGVVMLELLTGRKSYDKKRDRGEQFLVRWAIPQLHDIDALAKMVDPSLKGDYPAKSLSHFADVISRCVQSEPEYRPLMSEVVQDLSDMI 756          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.469e-45
Identity = 102/242 (42.15%), Postives = 141/242 (58.26%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EF  +++++S ++HEN V LLGYC +   ++L Y F SNGSL D L+G      A    +L W  R+ IA+GAA+GL YLH      +IHRD+KSSN+L+     AK+ADF  S  AP       S  V GT GY  PEY  T QL+ KSDV+SFGVVLLE+++GR+P++   PR + SLV WA P +   KV + VD  + G Y              C++  + +RP M  +V+ L+  L
Sbjct:  636 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGE-----ASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 872          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.918e-45
Identity = 105/252 (41.67%), Postives = 146/252 (57.94%), Query Frame = -1
Query:  102 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGPAGE 854
            EF+  V+ +  ++H N V+L+GYC +   R+L YE+ SNG+L D LH     K       LSW  RV +A+GAA+ LEYLHE  +P IIHR+ KS+NVL+ DD    ++D  L+      +    S ++L  +GY APE+  +G    +SDVYSFGVV+LELLTGR   D    RG+Q LV WA P+L + D + + VD  L G YP           + CVQ E +FRP MS VV+ L  ++      +G+
Sbjct:  527 EFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKK-----LSWNTRVSMALGAARALEYLHEVCEPPIIHRNFKSANVLLDDDLSVLVSDCGLAPLISSGSVSQLSGQLLAAYGYGAPEFD-SGIYTWQSDVYSFGVVMLELLTGRMSYDRDRSRGEQFLVRWAIPQLHDIDALGKMVDPSLNGQYPAKSLSHFADIISRCVQSEPEFRPLMSEVVQDLLDMIRRERHGSGD 772          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1154_ARATH3.735e-4940.83Probable serine/threonine-protein kinase At1g01540... [more]
SRF6_ARATH6.371e-4944.67Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
SRF7_ARATH5.393e-4845.49Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
BIK1_ARATH9.200e-4845.27Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK1B_ARATH2.677e-4743.57Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH3.496e-4744.44Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1A_ARATH3.496e-4744.22Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
SRF1_ARATH2.959e-4643.62Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]
NORK_MEDTR1.469e-4542.15Nodulation receptor kinase OS=Medicago truncatula ... [more]
SRF3_ARATH1.918e-4541.67Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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