CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.166e-34
Identity = 90/245 (36.73%), Postives = 127/245 (51.84%), Query Frame = -1
Query:  123 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNA 857
            +EF A+V ++ R+ H N V L+GYC +     L YE+ +NG L   L G+ G        VL W+ R+ IAV  A GLEYLH    P ++HRD+KS N+L+ +   AK+ADF LS           ST V+GT GY  PEY  T +L  KSDVYSFG+VLLE++T +  ++       + +       L+   +   VD  L G+Y              CV      RP+MS VV+ L+  + +
Sbjct:  612 KEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHG------DCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRSFSVGEESHVSTGVVGTPGYLDPEYYRTYRLTEKSDVYSFGIVLLEIITNQPVLEQA--NENRHIAERVRTMLTRSDISTIVDPNLIGEYDSGSVRKALKLAMSCVDPSPVARPDMSHVVQELKQCIKS 848          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.166e-34
Identity = 84/243 (34.57%), Postives = 136/243 (55.97%), Query Frame = -1
Query:  150 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGD-------YPPXXXXXXXXXXALCVQYEADFRPNMSIVV 857
            +EF+ +V++++RL+H N VQ+LG C++G  ++L YE+  N SL   L G+           L+W +R  I  G A+GL YLH+ +   IIHRD+K SN+L+  + + KI+DF ++          ++ +V+GT+GY +PEYAM G  + KSDV+SFGV++LE+++G+K         +  L+++   +  E +  + VD  +          + P           LCVQ  A+ RP MS VV
Sbjct:  567 DEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSK------LNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGTYGYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGKKNRGFYNLDYENDLLSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSSVV 803          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.166e-34
Identity = 88/235 (37.45%), Postives = 128/235 (54.47%), Query Frame = -1
Query:  150 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVV 854
            EF  +VS+++RL+H+N V+LLG+C +G   +L YEF  N SL   +             +L+W+ R +I  G A+GL YLHE +   IIHRD+K+SN+L+  +   K+ADF  +        R  + R+ GT GY APEY   GQ++AKSDVYSFGV+LLE+++G +          + L  +A  +  E K    +D  L  + P            LCVQ  +  RP MS V+
Sbjct:  388 EFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDE------DKRSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMISGERNNSFE----GEGLAAFAWKRWVEGKPEIIIDPFL-IENPRNEIIKLIQIGLLCVQENSTKRPTMSSVI 611          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34
Identity = 79/201 (39.30%), Postives = 122/201 (60.70%), Query Frame = -1
Query:  249 LAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKL-SEDKVRQCVDARLG 848
            LA+V ++  ++H N V+LLG C +    +L YE+  NGSL D+LHG      A       W    +IA+G A+G+ YLH   DP I+HRD+K SN+L+  D  A++ADF ++       +    + V G++GY APEYA T Q++ KSD+YS+GV+LLE++TG++ V+     G  S+V W   KL +++ V + +D  +G
Sbjct:  767 LAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHGGDKTMTA----AAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLIQTDESM---SVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEG-NSIVDWVRSKLKTKEDVEEVLDKSMG 959          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK7_ARATH (Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana GN=CRK7 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34
Identity = 91/250 (36.40%), Postives = 132/250 (52.80%), Query Frame = -1
Query:  111 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGP 854
            EF  +V +V+ L+H+N V++LG+ ++   R+L YE+  N SL + L    +KG         L W QR  I  G A+G+ YLH+ +   IIHRD+K+SN+L+  D   KIADF ++        + +++R++GT+GY +PEYAM GQ + KSDVYSFGV++LE+++GRK          Q LVT A            VD  +                 LCVQ +   RP MS +   L     A P P
Sbjct:  376 EFKNEVVVVANLRHKNLVRILGFSIEREERILVYEYVENKSLDNFLFDPAKKGQ--------LYWTQRYHIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGMDQTQQNTSRIVGTYGYMSPEYAMRGQFSMKSDVYSFGVLVLEIISGRKNNSFIETDDAQDLVTHAWRLWRNGTALDLVDPFIADSCRKSEVVRCTHIGLLCVQEDPVKRPAMSTISVMLTSNTMALPAP 617          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.523e-34
Identity = 89/254 (35.04%), Postives = 138/254 (54.33%), Query Frame = -1
Query:  105 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD-HTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL--QPLLNARPGPAG 857
            +EF  +V +V++L+H N V+LLGYC++   ++L YEF  N SL   L      K  Q    L W +R  I  G  +G+ YLH+ +   IIHRD+K+SN+L+  D + KIADF ++  +    +  ++ R+ GTFGY  PEY + GQ + KSDVYSFGV++LE++ G+K    +      ++LVT+     +     + VD  +  +              LCVQ +   RPN+S ++  L    L+ + P P G
Sbjct:  406 QEFKNEVVLVAKLQHRNLVKLLGYCLEPEEKILVYEFVPNKSLDYFLFDP--TKQGQ----LDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQSVANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPLELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPPG 653          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: RPK1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana GN=RPK1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.599e-34
Identity = 83/248 (33.47%), Postives = 133/248 (53.63%), Query Frame = -1
Query:  120 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ--SLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNAR 857
            ++F A++S +  ++H N V L+GY    T   L Y + S G+L D +  R           + W+   KIA+  A+ L YLHE+  P ++HRDIK SN+L+ ++  A ++DF LS       + + +T V GTFGY APEYAMT +++ K+DVYS+G+VLLEL++ ++ +D +    +   ++V+WA   LS+ K ++     L    PP            C       RP M   V+ L+ +  +R
Sbjct:  300 QQFHAEISALEMVRHPNLVMLIGYHASETEMFLIYNYLSGGNLQDFIKERSKA-------AIEWKVLHKIALDVARALSYLHEQCSPKVLHRDIKPSNILLDNNYNAYLSDFGLSKLLGTSQSHV-TTGVAGTFGYVAPEYAMTCRVSEKADVYSYGIVLLELISDKRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVDSLSIRPTMKQAVRLLKRIQPSR 539          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: IRAK4_BOVIN (Interleukin-1 receptor-associated kinase 4 OS=Bos taurus GN=IRAK4 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 3.394e-34
Identity = 94/248 (37.90%), Postives = 134/248 (54.03%), Query Frame = -1
Query:  114 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPG 857
            ++F  ++ ++++ +HEN V+LLG+  DG    L Y +  NGSL D L    G       P LSW  R KIA GAA GL YLHE    H IHRDIKS+N+L+ +D  AKI+DF L+  +   A  + ++R++GT  Y APE A+ G++  KSD+YSFGVVLLE++TG   VD    R  Q L+        E+K  +    R   D             + C+  + + RP+    +K +Q LL    G
Sbjct:  229 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT------PPLSWNMRCKIAQGAANGLSYLHEN---HHIHRDIKSANILLDEDFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE--HREPQLLLDIKEEIEDEEKTIEDYVDRKMNDIDSTSIETMYSVASQCLHEKKNKRPD----IKKVQQLLEEMTG 460          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.433e-34
Identity = 87/252 (34.52%), Postives = 135/252 (53.57%), Query Frame = -1
Query:  126 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS-----TRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARL---GGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLN 857
            ++ L +V ++ ++ H + V+LLG CVD    +L YEF  NG+L + LHG       +    L+W++R++IA   A+GL YLH  A P I HRD+KSSN+L+ +   AK++DF LS    D+    ++     T   GT GY  PEY    QL  KSDVYSFGVVLLE++T +K +D T      +LV +    + ++++ +C+D  L                   + C+      RP+M  V   ++ ++N
Sbjct:  402 DQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSD----RTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLV-DLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIIN 648          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.433e-34
Identity = 86/242 (35.54%), Postives = 129/242 (53.31%), Query Frame = -1
Query:  132 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 857
            EEF+ +V ++S++ H N V+LLG C++    +L YEF  NG+L + LH       +    + +W+ R++IAV  A  L YLH  A   I HRDIKS+N+++ +   AK++DF  S         L +T V GT GY  PEY  + Q   KSDVYSFGVVL EL+TG K V     +  ++L T+ T  + E+++   +DAR+                  C+  +   RP+M  V   L+ +
Sbjct:  472 EEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHD-----DSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNIMLDEKHRAKVSDFGTSRTVTVDHTHL-TTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLAELITGEKSVSFLRSQEYRTLATYFTLAMKENRLSDIIDARIRDGCKLNQVTAAAKIARKCLNMKGRKRPSMRQVSMELEKI 707          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5169_ARATH1.166e-3436.73Probable LRR receptor-like serine/threonine-protei... [more]
SRK6_BRAOE1.166e-3434.57Putative serine/threonine-protein kinase receptor ... [more]
CRK40_ARATH1.166e-3437.45Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y5148_ARATH1.523e-3439.30Probable leucine-rich repeat receptor-like protein... [more]
CRK7_ARATH1.523e-3436.40Cysteine-rich receptor-like protein kinase 7 OS=Ar... [more]
CRK12_ARATH1.523e-3435.04Putative cysteine-rich receptor-like protein kinas... [more]
RPK1_ARATH2.599e-3433.47Probable LRR receptor-like serine/threonine-protei... [more]
IRAK4_BOVIN3.394e-3437.90Interleukin-1 receptor-associated kinase 4 OS=Bos ... [more]
WAKLQ_ARATH4.433e-3434.52Wall-associated receptor kinase-like 20 OS=Arabido... [more]
WAKLJ_ARATH4.433e-3435.54Wall-associated receptor kinase-like 10 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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