CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.505e-45
Identity = 101/242 (41.74%), Postives = 141/242 (58.26%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EF  +++++S ++HEN V LLGYC +   ++L Y F SNGSL D L+G    +      +L W  R+ IA+GAA+GL YLH      +IHRD+KSSN+L+     AK+ADF  S  AP       S  V GT GY  PEY  T QL+ KSDV+SFGVVLLE+++GR+P++   PR + SLV WA P +   KV + VD  + G Y              C++  + +RP M  +V+ L+  L
Sbjct:  635 EFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKR-----KILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 871          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44
Identity = 107/247 (43.32%), Postives = 148/247 (59.92%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK----VRQCVDARLGGDYPPXXXXXXXXXXAL-CVQYEADFRPNMSIVVKALQPLL 854
            EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK       L W +R+KIA+G+ KGL YLHE ADP IIHRD+KS+N+L+ +   AK+ADF LS    D      +T+V GT GY  PEY MT QL  KSDVY FGVV+LELLTG+ P+D    RG   +V     K+ + +    +++ +D  +  +             AL CV+ E   RP MS VV+ L+ +L
Sbjct:  674 EFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSPID----RGSY-VVKEVKKKMDKSRNLYDLQELLDTTIIQNSGNLKGFEKYVDVALQCVEPEGVNRPTMSEVVQELESIL 908          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.618e-44
Identity = 103/234 (44.02%), Postives = 142/234 (60.68%), Query Frame = -1
Query:  141 VSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 839
            V  +S+++H+N  +L+GYC +    +L YE+  NGSLH+ LH    +      P L+W  RV+IA+G A+ +EYLHE   P ++H++IKSSN+L+  D   +++D+ LS         L +++ LG  GY+APE         KSDVYSFGVV+LELLTGR P D   PR ++SLV WATP+L + D +    D  L G YPP          ALCVQ E +FRP MS VV+AL
Sbjct:  451 VMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLH----LSDCFSKP-LTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLSK------FYLRTSQNLGE-GYNAPEARDPSAYTPKSDVYSFGVVMLELLTGRVPFDGEKPRPERSLVRWATPQLHDIDALSNIADPALHGLYPPKSLSRFADIIALCVQVEPEFRPPMSEVVEAL 672          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.063e-43
Identity = 99/240 (41.25%), Postives = 142/240 (59.17%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            + F+ +V ++S+++H+N V   G+C +   ++L YE+ S GSL D L+G +  + +     L+W  R+K+AV AAKGL+YLH  ++P IIHRD+KSSN+L+  D  AK++DF LS Q     A   +T V GT GY  PEY  T QL  KSDVYSFGVVLLEL+ GR+P+ H+      +LV WA P L      + VD  L   + P            CV  +A  RP+++ V+  L+
Sbjct:  645 DSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHS-----LNWVSRLKVAVDAAKGLDYLHNGSEPRIIHRDVKSSNILLDKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWARPNLQAGAF-EIVDDILKETFDPASMKKAASIAIRCVGRDASGRPSIAEVLTKLK 878          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.823e-43
Identity = 94/245 (38.37%), Postives = 140/245 (57.14%), Query Frame = -1
Query:  120 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNAR 854
            EF  +V M+++ +H + V L+GYC + +  ++ YE+   G+L D L+           P LSW+QR++I VGAA+GL YLH  +   IIHRD+KS+N+L+ D+ +AK+ADF LS   PD+     ST V G+FGY  PEY    QL  KSDVYSFGVV+LE++ GR  +D +LPR + +L+ WA   + + K+   +D  L G                C+      RP M  ++  L+ +L  +
Sbjct:  527 EFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYD------LDDKPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGKVKLEEVKKYCEVTEKCLSQNGIERPAMGDLLWNLEFMLQVQ 765          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.823e-43
Identity = 99/251 (39.44%), Postives = 134/251 (53.39%), Query Frame = -1
Query:  105 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGPAG 857
            +EF A+V ++ R+ H N V L+GYC + ++  L YE+A NG L   L G +G      G  L W  R+KI V  A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PEY  T +LN KSDVYSFG+VLLE++T R  +  T  R +  +  W    L++  +   VD RL  DY P            CV   ++ RP MS V   L+  L       G
Sbjct:  612 KEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERG------GSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVAGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQT--REKPHIAAWVGYMLTKGDIENVVDPRLNRDYEPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQCLTLENSKRG 854          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.823e-43
Identity = 94/242 (38.84%), Postives = 139/242 (57.44%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EF  ++ M+SRL+H + V L+G+C +    +L YE+ +NG+L   L G          P LSW+QR++  +G+A+GL YLH  ++  IIHRD+K++N+L+ ++ VAK++DF LS   P M     ST V G+FGY  PEY    QL  KSDVYSFGVVL E +  R  ++ TLP+ Q +L  WA     +  +   +D+ L G+Y P            C+  E   RP M  V+ +L+ +L
Sbjct:  560 EFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNL-------PPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSWQKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVL 794          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.911e-43
Identity = 100/244 (40.98%), Postives = 144/244 (59.02%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSE-DKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            EEF   VS +S + H+N  +L+GYC +    +L YE+ ++GSLH  LH       ++P   L+W  R++IA+G AK +EYLHE   P ++H++IKSSN+L+ ++   +++D+ L+N         H T      GY+APE         KSDVYSFGVV+LELLTGRKP D   P+ +QSLV WA P+L + D + + VD  L G Y P          ++CV  E   RP +S VV+AL+ L+
Sbjct:  456 EEFSHIVSSISSIHHKNMAELVGYCSEQGRNMLVYEYFTSGSLHRFLHLSDDF--SKP---LTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFH-------HRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPYDSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPALCGLYAPESVSSFADIVSICVMTEPGLRPPVSNVVEALKRLV 687          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.164e-42
Identity = 103/243 (42.39%), Postives = 136/243 (55.97%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +EF  ++ ++SRL H + + LLGYC DG+ R+L YEF ++GSL+  LHG    K       L+W +RV IAV AA+G+EYLH  A P +IHRDIKSSN+LI +D  A++ADF LS   P  +    S    GT GY  PEY     L  KSDVYSFGVVLLE+L+GRK +D     G  ++V WA P +    +   +D  L                  CV+     RP+M  V  AL+  L
Sbjct:  546 KEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHG----KDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEG--NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHAL 782          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.985e-42
Identity = 101/249 (40.56%), Postives = 143/249 (57.43%), Query Frame = -1
Query:  120 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ---PLLNAR 857
            +EF A+V ++ R+ H N V L+GYC DG +  L YE+ +NG L + + G++G      G VL+W+ R++IAV AA+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PEY  T  L+ KSDVYSFGVVLLE++T +   D T  R +  +  W    L++  ++  +D +L GDY              CV   ++ RP M+ VV  L     L NAR
Sbjct:  604 KEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVTDKT--RERTHINEWVGSMLTKGDIKSILDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVTELNECVALENAR 844          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NORK_PEA2.505e-4541.74Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5977_ARATH2.770e-4443.32Probable leucine-rich repeat receptor-like protein... [more]
SRF5_ARATH3.618e-4444.02Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
Y5487_ARATH3.063e-4341.25Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH6.823e-4338.37Probable receptor-like protein kinase At2g39360 OS... [more]
Y2289_ARATH6.823e-4339.44Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH6.823e-4338.84Probable receptor-like protein kinase At1g30570 OS... [more]
SRF4_ARATH8.911e-4340.98Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
CRI4_MAIZE1.164e-4242.39Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
Y5188_ARATH1.985e-4240.56Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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