CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.985e-42
Identity = 97/240 (40.42%), Postives = 143/240 (59.58%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            + F  +V+++S++ H+N V+LLG  + G   +L YE+ +N SLHD L  RK V   QP   L+W +R KI +G A+G+ YLHE+++  IIHRDIK SN+L+ DD   +IADF L+   P+    + ST + GT GY APEY + G+L  K+DVYSFGV+++E++TG++        G      W+  + S   V + VD  LG ++             LCVQ   D RP MS+VVK ++
Sbjct:  362 DHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDV---QP---LNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPEDKTHI-STAIAGTLGYMAPEYVVRGKLTEKADVYSFGVLMIEVITGKRNNAFVQDAGSILQSVWSLYRTS--NVEEAVDPILGDNFNKIEASRLLQIGLLCVQAAFDQRPAMSVVVKMMK 592          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.593e-42
Identity = 95/239 (39.75%), Postives = 137/239 (57.32%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+L+H + V L+GYC + +  +L YE+ +NG L   L+G          P LSW+QR++I +GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK+ADF LS   P +     ST V G+FGY  PEY    QL  KSDVYSFGVVL+E+L  R  ++  LPR Q ++  WA     +  + Q +D+ L G   P            C+      RP+M  V+  L+
Sbjct:  550 EFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADL-------PPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCCRPALNPVLPREQVNIAEWAMAWQKKGLLDQIMDSNLTGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLE 781          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.422e-42
Identity = 101/241 (41.91%), Postives = 139/241 (57.68%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            +EF  ++ M+S+L+H + V L+GYC D    VL YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ VAK++DF LS   P  A++ H ST V GTFGY  PEY     L  KSDVYSFGVVLLE+L  R     ++P  Q  L+ W     ++  V Q +D+ L  D               CVQ     RP M+ VV AL+
Sbjct:  565 KEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQILTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNFNKRTVDQIIDSDLTADITSTSMEKFCEIAIRCVQDRGMERPPMNDVVWALE 801          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42
Identity = 101/249 (40.56%), Postives = 144/249 (57.83%), Query Frame = -1
Query:  120 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ---PLLNAR 857
            +EF A+V ++ R+ H + V L+GYC DG +  L YE+ +NG L + + G++G      G VL+W+ R++IAV AA+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PEY  T  L+ KSDVYSFGVVLLE++T +  +D T  R +  +  W    L++  ++  VD +L GDY              CV   ++ RP M+ VV  L     L NAR
Sbjct:  622 KEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLHNGCRPPMVHRDVKTTNILLNERCGAKLADFGLSRSFPIDGECHVSTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVIDKT--RERPHINDWVGFMLTKGDIKSIVDPKLMGDYDTNGAWKIVELALACVNPSSNRRPTMAHVVMELNDCVALENAR 862          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.776e-42
Identity = 93/239 (38.91%), Postives = 137/239 (57.32%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+ +H + V L+GYC +    +L YE+  NG++   L+G  G+      P L+W+QR++I +GAA+GL YLH      +IHRD+KS+N+L+ ++ +AK+ADF LS   P++     ST V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  +D TLPR   +L  WA     + ++ Q +D  L G+  P            C+      RP+M  V+  L+
Sbjct:  525 EFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG-SGL------PSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLDQIIDQSLRGNIRPDSLRKFAETGEKCLADYGVDRPSMGDVLWNLE 756          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42
Identity = 97/251 (38.65%), Postives = 144/251 (57.37%), Query Frame = -1
Query:  114 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL---NARPG 857
            +EF A+V ++ R+ H+N V L+GYC +G +  L YE+ +NG L + + G++G      G +L+W+ R+KI V +A+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST V GT GY  PEY  T  LN KSDVYSFG+VLLE++T +  ++ +  R +  +  W    L++  ++  +D +L GDY              C+   +  RP MS VV  L   L   NAR G
Sbjct:  631 KEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRG------GSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHLHAKLADFGLSRSFPIEGETHVSTVVAGTPGYLDPEYYRTNWLNEKSDVYSFGIVLLEIITNQLVINQS--REKPHIAEWVGLMLTKGDIQNIMDPKLYGDYDSGSVWRAVELAMSCLNPSSARRPTMSQVVIELNECLSYENARGG 873          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.852e-42
Identity = 99/245 (40.41%), Postives = 142/245 (57.96%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSN--QAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +EF A+V ++ R+ H N V L+GYC +     L YE+ SNG LH  L G+ G      G VL+W  R++IA+ AA GLEYLH    P ++HRD+KS+N+L+ ++  AKIADF LS   Q     +++ ST V GT GY  PEY +T +L+ KSDVYSFG++LLE++T ++ +D T  R   ++  W T  + +    Q VD +L G+Y              C    +  RPNMS V+  L+  L
Sbjct:  605 KEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHG------GSVLNWGTRLQIAIEAALGLEYLHTGCKPAMVHRDVKSTNILLDEEFKAKIADFGLSRSFQVGGDQSQV-STVVAGTLGYLDPEYYLTSELSEKSDVYSFGILLLEIITNQRVIDQT--RENPNIAEWVTFVIKKGDTSQIVDPKLHGNYDTHSVWRALEVAMSCANPSSVKRPNMSQVIINLKECL 840          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.287e-41
Identity = 98/247 (39.68%), Postives = 135/247 (54.66%), Query Frame = -1
Query:  114 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPG 854
            +F+ +V+++SR+ H N V L+GYC +   R+L YE+  NGSL D LHG    K       L W  R++IA  AAKGLEYLH   +P IIHRD+KSSN+L+  +  AK++DF LS Q  +    + S    GT GY  PEY  + QL  KSDVYSFGVVL ELL+G+KPV       + ++V WA   + +  V   +D  +  +               CV+     RP M  V+ A+Q  +    G
Sbjct:  646 QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKP------LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSV-AKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFGPELNIVHWARSLIRKGDVCGIIDPCIASNVKIESVWRVAEVANQCVEQRGHNRPRMQEVIVAIQDAIRIERG 885          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.195e-41
Identity = 97/242 (40.08%), Postives = 136/242 (56.20%), Query Frame = -1
Query:  132 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQ-QSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL 854
            EF+A++  + ++KH N V LLGYC     ++L YE+  NGSL   L  + G+       VL W +R+KIAVGAA+GL +LH    PHIIHRDIK+SN+L+  D   K+ADF L+       + + ST + GTFGY  PEY  + +   K DVYSFGV+LLEL+TG++P        +  +LV WA  K+++ K    +D  L                 LC+      RPNM  V+KAL+ +
Sbjct:  957 EFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGML-----EVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHV-STVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNLVGWAIQKINQGKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.195e-41
Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = -1
Query:  243 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGD 854
            EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH +   KG   G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ +D  A+++DF ++     +   L  + + GT GY  PEY  + +  AK DVYS+GV+LLELL+G+KP+D        +LV WA     E +  + +D  L  D
Sbjct:  899 EFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKG---GIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDEDFEARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPGEFGEDNNLVGWAKQLYREKRGAEILDPELVTD 1099          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK3_ARATH1.985e-4240.42Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
THE1_ARATH2.593e-4239.75Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5389_ARATH4.422e-4241.91Probable receptor-like protein kinase At5g38990 OS... [more]
Y1518_ARATH5.776e-4240.56Probable LRR receptor-like serine/threonine-protei... [more]
HERK_ARATH5.776e-4238.91Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
RLK6_ARATH9.852e-4238.65Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
MEE39_ARATH9.852e-4240.41Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH1.287e-4139.68Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH2.195e-4140.08Leucine-rich repeat receptor protein kinase EXS OS... [more]
BRL1_ARATH2.195e-4143.14Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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