CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.866e-41
Identity = 99/241 (41.08%), Postives = 136/241 (56.43%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            +EF  ++ M+S+L+H + V L+GYC +    VL YE+  +G+L D L  R         P LSW++R++I +GAA+GL+YLH  A   IIHRDIK++N+L+ ++ V K++DF LS   P  A++ H ST V GTFGY  PEY     L  KSDVYSFGVVLLE+L  R     ++P  Q  L+ W         V Q +D+ L  D               CVQ     RP M+ VV AL+
Sbjct:  558 KEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSD----PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGTVDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALE 794          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.866e-41
Identity = 97/249 (38.96%), Postives = 140/249 (56.22%), Query Frame = -1
Query:  108 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPGPA 854
            EF  ++ M+S+L+H + V L+G+C +    +L YE+ SNG L D L+G K      P P LSW+QR++I +G+A+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS  AP M     ST V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  ++  LPR Q +L  +A     +  + + +D ++ G                C+      RP M  V+  L+  L  +   A
Sbjct:  565 EFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKE-NDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAP-MDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPVINPQLPREQVNLAEYAMNLHRKGMLEKIIDPKIVGTISKGSLRKFVEAAEKCLAEYGVDRPGMGDVLWNLEYALQLQEASA 811          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.744e-41
Identity = 98/249 (39.36%), Postives = 142/249 (57.03%), Query Frame = -1
Query:  117 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLS-EDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPL--LNARP 854
            E+ ++V+ +  L H N V+LLGYC +    +L YEF   GSL   L  R       P P   W  R+KI +GAA+GL +LH      +I+RD K+SN+L+  +  AK++DF L+   P       +TR++GT+GY APEY  TG L  KSDV++FGVVLLE++TG    +   PRGQ+SLV W  P+LS + +V+Q +D  + G Y              C++ +   RP+M  VV+ L+ +  LN  P
Sbjct:  136 EWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMPKGSLESHLFRRN-----DPFP---WDLRIKIVIGAARGLAFLHS-LQREVIYRDFKASNILLDSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVVEVLEHIQGLNVVP 375          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.744e-41
Identity = 90/204 (44.12%), Postives = 123/204 (60.29%), Query Frame = -1
Query:  243 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGD 854
            EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH  K  KG   G  L W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+  D VA+++DF ++     +   L  + + GT GY  PEY  + +  AK DVYS+GV+LLELL+G+KP+D        +LV WA     E +  + +D  L  D
Sbjct:  898 EFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLH-EKTKKG---GIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGWAKQLYREKRGAEILDPELVTD 1097          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 4.889e-41
Identity = 95/245 (38.78%), Postives = 137/245 (55.92%), Query Frame = -1
Query:  123 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNA 857
            +EF  +  ++  + H N    +GYC DG S  L YE+ +NG+L D L        ++    LSW++R+ IA+ +A+GLEYLH    P I+HRD+K++N+L+ D+  AKIADF LS   P+       T V+GT GY  PEY  T +LN KSDVYSFG+VLLEL+TG++ +  T    + ++V +  P L    +   VD RL GD+              CV+     RPN + +V  L+  L A
Sbjct:  619 KEFQVEAELLLTVHHRNLASFVGYCDDGRSMALIYEYMANGNLQDYL-------SSENAEDLSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHYVEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLAA 856          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 96/243 (39.51%), Postives = 137/243 (56.38%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPP-XXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EFL++++++S+++H + V L+GYC + +  +L YE+   G L   L+G          P LSW+QR+++ +GAA+GL YLH  +   IIHRDIKS+N+L+ ++ VAK+ADF LS   P +     ST V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  VD  L R Q +L  WA     +  + Q VD  +  +  P             C  Y  D RP +  V+  L+ +L
Sbjct:  529 EFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG-------STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNLAEWAIEWQRKGMLDQIVDPNIADEIKPCSLKKFAETAEKCCADYGVD-RPTIGDVLWNLEHVL 763          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 100/251 (39.84%), Postives = 138/251 (54.98%), Query Frame = -1
Query:  114 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL---NARPG 857
            ++F A+V ++ R+ H N V L+GYC +G   VL YE+ SNG+L      ++ + G      LSW+ R++IA   A+GLEYLH    P +IHRDIKS N+L+ ++  AK+ DF LS   P  +    ST V G+ GY  PEY  T  L  KSDV+SFGVVLLE++T +  +D T  R +  +  W   KL+   ++  VD  + GDY              CV   +  RPNMS V   LQ  L   N+R G
Sbjct:  630 KQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNL------KQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIITSQPVIDQT--REKSHIGEWVGFKLTNGDIKNIVDPSMNGDYDSSSLWKALELAMSCVSPSSSGRPNMSQVANELQECLLTENSRKG 872          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 91/198 (45.96%), Postives = 121/198 (61.11%), Query Frame = -1
Query:  261 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 854
            EF A+V  +SR +H N V LLGYC     ++L Y +  NGSL   LH +  V G    P L W+ R++IA GAA+GL YLH+  +PHI+HRDIKSSN+L+ D  VA +ADF L+         + +T ++GT GY  PEY        K DVYSFGVVLLELLTGR+P+D   PRG + L++W     +E +  +  D
Sbjct:  783 EFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEK--VDGP---PSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYDTHV-TTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISWVLQMKTEKRESEIFD 974          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.386e-41
Identity = 99/242 (40.91%), Postives = 134/242 (55.37%), Query Frame = -1
Query:  129 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 854
            EF  ++ ++SRL H + + LLGYC +   R+L YEF ++GSLH+ LHG+      Q    L W +RV IAV AA+G+EYLH  A P +IHRDIKSSN+LI ++  A++ADF LS   P  +    +    GT GY  PEY     L  KSDVYSFGV+LLE+L+GRK +D     G  ++V WA P +    +   +D  L                  CV+     RP+M  V  AL+  L
Sbjct:  554 EFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQ----LDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEG--NIVEWAVPLIKAGDINALLDPVLKHPSEIEALKRIVSVACKCVRMRGKDRPSMDKVTTALERAL 789          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.340e-41
Identity = 96/248 (38.71%), Postives = 139/248 (56.05%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVD----GTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATP-KLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +++LA+V  +  + H N V+L+GYC +    G  R+L YE+ SN SL D L  R+          L W++R++I +GAA+GL YLH   D  +I+RD KSSNVL+ D    K++DF L+ + PD      +T  +GT GY APEY  TG L  KSDVYSFGVVL E++TGR+ ++   P  ++ L+ W         +    VD RL  +YP            LC++     RP M IVV+ L+ ++
Sbjct:  132 KQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRS-------HTLPWKKRLEIMLGAAEGLTYLH---DLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKII 369          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5900_ARATH2.866e-4141.08Putative receptor-like protein kinase At5g39000 OS... [more]
Y5613_ARATH2.866e-4138.96Probable receptor-like protein kinase At5g61350 OS... [more]
CX32_ARATH3.744e-4139.36Probable serine/threonine-protein kinase Cx32, chl... [more]
BRL3_ARATH3.744e-4144.12Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y4291_ARATH4.889e-4138.78Probable LRR receptor-like serine/threonine-protei... [more]
Y5241_ARATH6.386e-4139.51Probable receptor-like protein kinase At5g24010 OS... [more]
Y4245_ARATH6.386e-4139.84Probable LRR receptor-like serine/threonine-protei... [more]
PSKR1_DAUCA6.386e-4145.96Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
ACR4_ARATH6.386e-4140.91Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5707_ARATH8.340e-4138.71Probable receptor-like protein kinase At5g47070 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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