CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 92/239 (38.49%), Postives = 134/239 (56.07%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+L+H + V L+GYC +    +L Y++ ++G++ + L+  +        P L W+QR++I +GAA+GL YLH  A   IIHRD+K++N+L+ +  VAK++DF LS   P +     ST V G+FGY  PEY    QL  KSDVYSFGVVL E L  R  ++ TL + Q SL  WA     +  + Q VD  L G   P            CV  +   RP+M  V+  L+
Sbjct:  577 EFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQN-------PSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVLWNLE 808          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = -1
Query:  261 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVD 854
            EF  ++  +  ++H N V L GY +  T  +L Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH    P IIHRDIKSSN+L+ ++  A ++DF ++   P  A++ H ST VLGT GY  PEYA T ++N KSD+YSFG+VLLELLTG+K VD+     + +L      K  ++ V + VD
Sbjct:  688 EFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVK-------LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDENFEAHLSDFGIAKSIP--ASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTGKKAVDN-----EANLHQLILSKADDNTVMEAVD 873          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.060e-40
Identity = 85/183 (46.45%), Postives = 117/183 (63.93%), Query Frame = -1
Query:  306 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 854
            EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK +     G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct:  928 EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKI-----GIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTD-SADFGDNNLVGW 1104          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 93/243 (38.27%), Postives = 133/243 (54.73%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            +EF A+V ++ R+ H N V L+GYC +G    L YEF  NG L   L G+ G       P+++W  R++IA  AA GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P       ST + GT GY  PEY  T +L+ KSDVYSFG+VLLE++T +  +D    R +  +  W   +L+   + + +D +L GDY              C    +  RP MS VV  L+  L
Sbjct:  619 KEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGK------PIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRN--RRKSHITQWVGSELNGGDIAKIMDLKLNGDYDSRSAWRALELAMSCADPTSARRPTMSHVVIELKECL 853          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 89/248 (35.89%), Postives = 139/248 (56.05%), Query Frame = -1
Query:  114 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLV-TWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARPG 854
            +F  +V M+    H N ++L G+C+    R+L Y +  NGS+ D L    G K     P L W +R+ IA+GAA+GL YLHE+ +P IIHRD+K++N+L+ +   A + DF L+       + + +T V GT G+ APEY  TGQ + K+DV+ FGV++LEL+TG K +D    + ++ ++ +W     +E +  + VD  L G++             LC Q   + RP MS V+K L+ L+    G
Sbjct:  340 QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEK-----PSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHV-TTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLVEQCEG 581          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 85/183 (46.45%), Postives = 117/183 (63.93%), Query Frame = -1
Query:  306 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 854
            EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK     + G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct:  928 EFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRK-----KTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKQPTD-SADFGDNNLVGW 1104          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.221e-40
Identity = 84/183 (45.90%), Postives = 117/183 (63.93%), Query Frame = -1
Query:  306 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTW 854
            EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL D+LH  K     + G  L+W  R KIA+G+A+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L  + + GT GY  PEY  + + + K DVYS+GVVLLELLTG++P D +   G  +LV W
Sbjct:  923 EFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPK-----KAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGKRPTD-SPDFGDNNLVGW 1099          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.204e-39
Identity = 99/243 (40.74%), Postives = 133/243 (54.73%), Query Frame = -1
Query:  138 FLAQVSMVSRLKHENFVQLLGYCV-----DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 851
            F  +V +++ ++H N + L GYC      +G  R++  +  SNGSLHD L G    +       L+W  R +IA+G A+GL YLH  A P IIHRDIK+SN+L+ +   AK+ADF L+   P+    + STRV GT GY APEYA+ GQL  KSDVYSFGVVLLELL+ RK +         S+  WA   + E +    V+  +    PP           LC   +   RP M  VVK L+
Sbjct:  324 FAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQ-------LAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHM-STRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLE 558          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.573e-39
Identity = 89/239 (37.24%), Postives = 132/239 (55.23%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+ +H + V L+GYC +    +L YE+  NG+L   L+G   +        LSW+QR++I +G+A+GL YLH      +IHRD+KS+N+L+ ++ +AK+ADF LS   P++     ST V G+FGY  PEY    QL  KSDVYSFGVV+ E+L  R  +D TL R   +L  WA     + ++   +D  L G   P            C+      RP+M  V+  L+
Sbjct:  522 EFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGLLS-------LSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVLWNLE 753          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.573e-39
Identity = 91/239 (38.08%), Postives = 136/239 (56.90%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ ++SRL+H++ V L+GYC +G    L Y++ + G+L + L+  K        P L+W++R++IA+GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS   P+M     +T V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  ++ +LP+ Q SL  WA     +  +   +D  L G                C+      RP M  V+  L+
Sbjct:  557 EFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYNTKK-------PQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKGNLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLE 788          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FERON_ARATH7.060e-4038.49Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
ERL1_ARATH7.060e-4046.00LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLLC7.060e-4046.45Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y5596_ARATH9.221e-4038.27Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH9.221e-4035.89Probable LRR receptor-like serine/threonine-protei... [more]
BRI1_SOLPE9.221e-4046.45Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_ARATH9.221e-4045.90Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
RKF3_ARATH1.204e-3940.74Probable LRR receptor-like serine/threonine-protei... [more]
Y5597_ARATH1.573e-3937.24Probable receptor-like protein kinase At5g59700 OS... [more]
ANX1_ARATH1.573e-3938.08Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
back to top