CF835847

Overview
NameCF835847
Unique NameCF835847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length857
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 96/239 (40.17%), Postives = 130/239 (54.39%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ M+S+L+H + V L+GYC +    +L YE+ SNG   D L+G    K   P   L+W+QR++I +GAA+GL YLH      IIHRD+KS+N+L+ +  VAK+ADF LS           ST V G+FGY  PEY    QL  KSDVYSFGVVLLE L  R  ++  LPR Q +L  WA     +  + + +D  L G   P            C+      RP M  V+  L+
Sbjct:  565 EFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYG----KNLSP---LTWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVA-FGQNHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLLEALCARPAINPQLPREQVNLAEWAMLWKQKGLLEKIIDPHLVGAVNPESMKKFAEAAEKCLADYGVDRPTMGDVLWNLE 795          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 95/238 (39.92%), Postives = 132/238 (55.46%), Query Frame = -1
Query:  141 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 854
            +F+A++  +S + H N V+L G C +G  R+L YE+  NGSL   L G K +        L W  R +I +G A+GL YLHE+A   I+HRD+K+SN+L+    V +I+DF L+    D    + STRV GT GY APEYAM G L  K+DVY+FGVV LEL++GR   D  L   ++ L+ WA     + +  + +D +L  D+             LC Q     RP MS VV  L
Sbjct:  734 QFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLH-------LDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDDKKTHI-STRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKL-TDFNMEEAKRMIGIALLCTQTSHALRPPMSRVVAML 962          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 96/242 (39.67%), Postives = 131/242 (54.13%), Query Frame = -1
Query:  138 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV-LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 857
            +EF A+V ++SR KHEN V L GYCV  ++R+L Y F  NGSL   LH          GP  L W +R+ I  GA+ GL Y+H+  +PHI+HRDIKSSN+L+  +  A +ADF LS     +  R H +T ++GT GY  PEY        + DVYSFGVV+LELLTG++P++   P+  + LV W      + K  +  D  L                 +CV      RPN+  VV  L+
Sbjct:  842 KEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENP------EGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLI--LPYRTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPMEVFRPKMSRELVAWVHTMKRDGKPEEVFDTLLRESGNEEAMLRVLDIACMCVNQNPMKRPNIQQVVDWLK 1075          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.054e-39
Identity = 92/239 (38.49%), Postives = 136/239 (56.90%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF  ++ ++SRL+H++ V L+GYC +G    L Y++ S G+L + L+  K        P L+W++R++IA+GAA+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS   P+M     +T V G+FGY  PEY    QL  KSDVYSFGVVL E+L  R  ++ +L + Q SL  WA     +  +   +D  L G   P            C+      RP M  V+  L+
Sbjct:  561 EFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKR-------PQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLSKEQVSLGDWAMNCKRKGTLEDIIDPNLKGKINPECLKKFADTAEKCLSDSGLDRPTMGDVLWNLE 792          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 94/238 (39.50%), Postives = 133/238 (55.88%), Query Frame = -1
Query:  141 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 854
            +F+A++  +S ++H N V+L G C +G  R+L YE+  NGSL   L G K +        L W  R +I +G A+GL YLHE+A   I+HRD+K+SN+L+    V K++DF L+    D    + STRV GT GY APEYAM G L  K+DVY+FGVV LEL++GR   D  L   ++ L+ WA     + +  + +D +L  ++             LC Q     RP MS VV  L
Sbjct:  733 QFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLH-------LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHI-STRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQL-TEFNMEEGKRMIGIALLCTQTSHALRPPMSRVVAML 961          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 93/238 (39.08%), Postives = 134/238 (56.30%), Query Frame = -1
Query:  141 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKAL 854
            EF+A++  + RL+H+N V L G+C      +L Y++  NGSL  +L+ R      Q G VLSW  R KIA G A GL YLHE+ +  +IHRDIK SNVLI DD   ++ DF L+ +  +  ++ ++T V+GT GY APE A  G+ ++ SDV++FGV+LLE+++GR+P D     G   L  W     +  ++   VD RLG  Y             LC       RP+M  V++ L
Sbjct:  403 EFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRP----RQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLA-RLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTD----SGTFFLADWVMELHARGEILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYL 631          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.683e-39
Identity = 101/249 (40.56%), Postives = 139/249 (55.82%), Query Frame = -1
Query:  117 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLH-STRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGD-YPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLLNARP 854
            EF  ++  +  ++H N V L GY +     +L Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH    P IIHRDIKSSN+L+  +  A+++DF ++   P  A + + ST VLGT GY  PEYA T +LN KSD+YSFG+VLLELLTG+K VD+     + +L      K  ++ V + VDA +                  LC +     RP M  V + L  L+ + P
Sbjct:  691 EFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVK-------LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIP--ATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDN-----EANLHQMILSKADDNTVMEAVDAEVSVTCMDSGHIKKTFQLALLCTKRNPLERPTMQEVSRVLLSLVPSPP 925          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.504e-39
Identity = 88/247 (35.63%), Postives = 142/247 (57.49%), Query Frame = -1
Query:  129 EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP--DMAARLHSTRV-LGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDK-VRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQPLL 857
            E+F   +   S+L+H N V LLG+C++    +L YE+  + SL++ +H        +    LSW  R++IA+G A+ L+YLH    P I H D+K++N+L+ ++   +IAD  L++  P    + +L ++ + +   GY APE+   G    KSD Y+ GV+LLELLTGRK  D + PRG+Q LV WA+ +L + + + Q +D  + G +            +LC Q E +FRP +S +V+AL  L+
Sbjct:  456 EQFTEVLQTASKLRHPNIVTLLGFCIENGEHLLVYEYVGHLSLYNAMHD-------EVYKPLSWGLRLRIAIGVARALDYLHSSFCPPIAHSDLKATNILLDEELTPRIADCGLASLRPLTSNSVKLRASEIAIQNTGYIAPEHGQPGSSGTKSDTYALGVLLLELLTGRKAFDSSRPRGEQLLVKWASTRLHDRRSLEQMIDGGIAGTFSSRVASQYADIISLCTQAEKEFRPPVSEIVEALTALI 695          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 90/240 (37.50%), Postives = 134/240 (55.83%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQ-SLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            +F  ++ M+S   H N ++L+GYC   + R+L Y + SNGS+   L  +         P L W  R KIA+GAA+GL YLHE+ DP IIHRD+K++N+L+ +   A + DF L+       + + +T V GT G+ APEY  TGQ + K+DV+ FG++LLEL+TG + ++      Q+ +++ W      E KV + VD  LG  Y             LC Q+    RP MS VV+ L+
Sbjct:  340 QFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK---------PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHV-TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLE 569          
BLAST of CF835847 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.576e-39
Identity = 93/239 (38.91%), Postives = 127/239 (53.14%), Query Frame = -1
Query:  138 EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVRQCVDARLGGDYPPXXXXXXXXXXALCVQYEADFRPNMSIVVKALQ 854
            EF+ ++ M+S L+H N V+L G CV+G   +L YE+  N  L   L G+      +    L W  R KI +G AKGL +LHE++   I+HRDIK+SNVL+  D  AKI+DF L+    D    + STR+ GT GY APEYAM G L  K+DVYSFGVV LE+++G+   +         L+ WA        + + VD  L  DY             +C       RP MS VV  ++
Sbjct:  718 EFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLK----LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHI-STRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIE 951          
The following BLAST results are available for this feature:
BLAST of CF835847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2214_ARATH2.054e-3940.17Probable receptor-like protein kinase At2g21480 OS... [more]
Y1561_ARATH2.054e-3939.92Probable LRR receptor-like serine/threonine-protei... [more]
PSYR1_ARATH2.054e-3939.67Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
ANX2_ARATH2.054e-3938.49Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
Y5614_ARATH2.683e-3939.50Probable LRR receptor-like serine/threonine-protei... [more]
LRKA2_ARATH2.683e-3939.08Lectin-domain containing receptor kinase A4.2 OS=A... [more]
ERL2_ARATH2.683e-3940.56LRR receptor-like serine/threonine-protein kinase ... [more]
SRF2_ARATH3.504e-3935.63Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]
Y2239_ARATH4.576e-3937.50Probable LRR receptor-like serine/threonine-protei... [more]
Y1765_ARATH4.576e-3938.91Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835847 ID=CF835847; Name=CF835847; organism=Citrus sinensis; type=EST; length=857bp
TTTTTTTTTTTTTTAATAGTTTGCAAGCCTGCATGTGTGCGCATACTTGC
CCACACACAAATGGGGGAGAGAGAGAGTCACTAGCTTGACTAGCTTGCTG
ATTCACCAGCAGGTCCAGGCCGTGCATTTAGCAGGGGCTGGAGGGCTTTG
ACAACAATGCTCATATTTGGACGGAAATCAGCTTCATACTGAACACACAG
AGCAGCAACTGCAGCCATCTTTGCAACTGCCTTGGGAGGATAATCTCCTC
CTAGTCTTGCATCAACGCATTGCCTAACCTTATCTTCACTAAGTTTCGGT
GTGGCCCATGTCACTAGACTCTGCTGTCCACGTGGTAGTGTATGATCGAC
AGGTTTTCGACCTGTCAGAAGCTCAAGCAGAACAACACCAAAGCTGTATA
CATCACTCTTTGCATTCAACTGTCCAGTCATTGCATACTCAGGAGCATGA
TAACCAAAAGTTCCAAGAACACGAGTAGAATGAAGGCGAGCTGCCATATC
AGGAGCTTGATTAGATAAATCAAAGTCGGCAATCTTTGCTACATCATCAT
CAAAAATTAGTACATTGCTGGACTTAATATCGCGATGGATAATATGAGGA
TCTGCCTTCTCATGCAAGTATTCAAGCCCTTTCGCAGCCCCTACAGCAAT
TTTCACTCGCTGTTGCCATGACAAAACAGGACCAGGCTGAGCTCCTTTTA
CACCTTTCCTCCCATGAAGAATATCATGAAGAGATCCATTAGATGCAAAC
TCGTAGGCAAGCACACGGGAAGTCCCATCAACACAATACCCGAGCAGCTG
AACAAAGTTTTCATGCTTCAACCTTGATACCATGGAAACCTGTGCTAAAA
ACTCCTC
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