CF835848

Overview
NameCF835848
Unique NameCF835848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.198e-23
Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            IS+  L+E T+NF     +G GS+G VYYG +K G   A+K   D S   + +F+ +V+++SR+ H N V L+GYC +   R+L YE+  NGSL D LHG    K       L W  R++IA  AAKGLEYLH
Sbjct:  596 ISLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK------PLDWLTRLQIAQDAAKGLEYLH 720          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 58/134 (43.28%), Postives = 81/134 (60.45%), Query Frame = 3
Query:  327 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            A + +EL + T NF     +G G YG+VY G L +G   AIK+    S Q   EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK       L W +R+KIA+G+ KGL YLH
Sbjct:  621 AFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGSGKGLAYLH 747          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23
Identity = 59/146 (40.41%), Postives = 82/146 (56.16%), Query Frame = 3
Query:  297 AVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++ V   E P   ++   L E T  F    ++G G +G VY   L+ G   AIKKL   + Q D EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH +   KG   G  L+W  R KIA+GAA+GL +LH
Sbjct:  834 SINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKG---GIYLNWAARKKIAIGAARGLAFLH 976          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.778e-23
Identity = 61/146 (41.78%), Postives = 82/146 (56.16%), Query Frame = 3
Query:  297 AVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++ V   E P   ++   L E T  F  +++IG G +G VY   L  G   AIKKL   + Q D EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH  K  KG   G  L W  R KIA+GAA+GL +LH
Sbjct:  833 SINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLH-EKTKKG---GIFLDWSARKKIAIGAARGLAFLH 974          

HSP 2 Score: 22.3274 bits (46), Expect = 1.778e-23
Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 1
Query:  169 ASAVVKKMICIKLLTMAMHTWLKVQQE 249
            ++ +V   +CI +L MA++   KVQ++
Sbjct:  778 SAGIVFSFMCIVMLIMALYRARKVQKK 804          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.043e-23
Identity = 59/147 (40.14%), Postives = 83/147 (56.46%), Query Frame = 3
Query:  294 QAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +A  V P  V   +V +L+  T +F  + L+GEG++GRVY    + G   A+KK+D+S  P    ++F   VS ++ L HEN  +L GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G A+ LEYLH
Sbjct:  395 KAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFEDGKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLH-----LAEEESKPLIWNPRVKIALGTARALEYLH 536          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23
Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S+ EL+E+T+NF  + +IG G +G VY G +  G   AIK+ +  S+Q   EF  ++ M+S+L+H + V L+GYC +    +L YE+ SNG   D L+G    K   P   L+W+QR++I +GAA+GL YLH
Sbjct:  514 SLSELQEVTKNFDASEIIGVGGFGNVYIGTIDDGTQVAIKRGNPQSEQGITEFHTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEYMSNGPFRDHLYG----KNLSP---LTWKQRLEICIGAARGLHYLH 638          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.668e-23
Identity = 61/141 (43.26%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  312 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            PI     +V  L+  T +F    +IGEGS GRVY     +G   AIKK+D    S Q ++ FL  VS +SRL+H N V L GYC +   R+L YE+  NG+L D LH             L+W  RVK+A+G AK LEYLH
Sbjct:  377 PITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLH-----TNDDRSMNLTWNARVKVALGTAKALEYLH 512          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23
Identity = 55/132 (41.67%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S+ EL+E T+NF  + +IG G +G VY G L  G   A+K+ +  S+Q   EF  ++ M+S+L+H + V L+GYC + +  +L YEF SNG   D L+G    K   P   L+W+QR++I +G+A+GL YLH
Sbjct:  515 SLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG----KNLAP---LTWKQRLEICIGSARGLHYLH 639          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.943e-23
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 3
Query:  303 KVQPIEVPAISVDE-----LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            K  P  +P  SV       L++ TE+F    LIG G  G VY   L +G   A+KKLD   + +Q D EF+  V+ +  ++H N V+L+GYC +   R+L YE+ SNG+L D LH     K       LSW  RV +A+GAA+ LEYLH
Sbjct:  459 KTSPKRLPLTSVKHYSIASLQQYTESFAQENLIGSGMLGSVYRARLPNGKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFK-----KKLSWNTRVSMALGAARALEYLH 602          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22
Identity = 57/134 (42.54%), Postives = 87/134 (64.93%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDAS--KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S +EL++ T  F  ++ +G+GS+  V+ GIL+ G   A+K+ + AS  K+  +EF  ++ ++SRL H + + LLGYC DG+ R+L YEF ++GSL+  LHG    K       L+W +RV IAV AA+G+EYLH
Sbjct:  494 SYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHG----KDPNLKKRLNWARRVTIAVQAARGIEYLH 623          
The following BLAST results are available for this feature:
BLAST of CF835848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
Y1677_ARATH1.198e-2344.36Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH1.564e-2343.28Probable leucine-rich repeat receptor-like protein... [more]
BRL1_ARATH1.564e-2340.41Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
BRL3_ARATH1.778e-2341.78Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
SRF7_ARATH2.043e-2340.14Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
Y2214_ARATH2.668e-2341.67Probable receptor-like protein kinase At2g21480 OS... [more]
SRF8_ARATH2.668e-2343.26Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y4391_ARATH5.943e-2341.67Probable receptor-like protein kinase At4g39110 OS... [more]
SRF3_ARATH5.943e-2340.94Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
CRI4_MAIZE2.258e-2242.54Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835848 ID=CF835848; Name=CF835848; organism=Citrus sinensis; type=EST; length=725bp
AAGCGCTTTACTACTTTTTTCTTCATCCTGCGCACCTATCGTCGTCTTAT
CCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATTCAAAATATCCAGCT
CGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAGAGGGGCATTATTGT
GGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCAT
AAAGCTGCTGACAATGGCAATGCATACATGGTTAAAAGTTCAGCAGGAAC
TGATGGAGCCTATCATGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTG
TGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAG
GAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATA
TGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAA
AAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTT
TCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTA
TTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATG
GATCTCTTCATGATATTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAG
CCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGC
TGCGAAAGGGCTTGAATACTTGCAT
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