CF835848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 53/142 (37.32%), Postives = 84/142 (59.15%), Query Frame = 3 Query: 303 KVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 K + +E+P I ++ + + TENF + +G+G +G VY G L G A+K+L S Q +EF+ +V++++RL+H N VQ+LG C++G ++L YE+ N SL L G+ L+W +R I G A+GL YLH Sbjct: 507 KFEELELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGK------TRRSKLNWNERFDITNGVARGLLYLH 642
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 68/195 (34.87%), Postives = 99/195 (50.77%), Query Frame = 3 Query: 174 GCCEEDDMHKAADNGNAYMVKSSAGTDG-------AYHASEAAPKGAQAVKVQPIE-VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE---FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 G + + H+ NGNA + + A +EA+ K + P+ V +V L++ T +F LIG G G VY L G A++KLD EE FL V+ + R++H N VQL+G+C + + R+L +E+ NG+LHD+LH +K LSW RV+IA+ AAK LEYLH Sbjct: 406 GSESKQESHEIDMNGNAMDLMHPSSIPPIKRVIAKATEPAEASLKRTTSKSHGPLTAVKHFTVASLQQHTNSFSHENLIGTGMLGSVYRAELPGGKLFAVRKLDKKSPNHEEEGKFLELVNNIDRIRHANIVQLVGFCSEHSQRLLIHEYCRNGTLHDLLHIDDRLK-----IELSWNVRVRIALEAAKALEYLH 595
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20 Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 IS EL+ T NF + +IG G +G V+ G LK A+K+ S+Q EFL++++++S+++H + V L+GYC + + +L YE+ G L L+G P LSW+QR+++ +GAA+GL YLH Sbjct: 477 ISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG-------STNPPLSWKQRLEVCIGAARGLHYLH 602
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.114e-20 Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 3 Query: 327 AISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 A + +ELK T+NF + L+GEG +G V+ G + SG A+K+L Q +E+L +V+ + +L H N V L+GYC +G +R+L YEF GSL + L R GAQP L+W R+K+AVGAAKGL +LH Sbjct: 73 AFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRR----GAQP---LTWAIRMKVAVGAAKGLTFLH 209
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20 Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 3 Query: 282 PKGAQAVKVQPIE-VPA-----ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 P G + +P + +PA S+ E+K T +F +IG G +G VY G + G A+K+L+ S Q +EF ++ M+S+L+H + V L+GYC + VL YE+ +G+L D L R P LSW++R++I +GAA+GL+YLH Sbjct: 484 PHGTDSTNTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTS----DPPLSWKRRLEICIGAARGLQYLH 635
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 53/138 (38.41%), Postives = 76/138 (55.07%), Query Frame = 3 Query: 315 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 ++ ++ ++K T+NF IGEG +G VY G L G A+K+L A S+Q + EF+ ++ M+S L+H N V+L G CV+G +L YE+ N L L G K L W R KI +G AKGL +LH Sbjct: 661 LQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFG----KDESSRLKLDWSTRKKIFLGIAKGLTFLH 794
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1518_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51860 OS=Arabidopsis thaliana GN=At1g51860 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 52/132 (39.39%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 I+ E+ ++T NF ++G+G +G VY+G L A +S Q +EF A+V ++ R+ H + V L+GYC DG + L YE+ +NG L + + G++G G VL+W+ R++IAV AA+GLEYLH Sbjct: 574 ITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLDGAEVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMANGDLRENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLH 697
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 50/129 (38.76%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 E+ +T NF ++G+G +G VY+G + + A+K L +S Q +EF A+V ++ R+ H+N V L+GYC +G + L YE+ +NG L + + G++G G +L+W+ R+KI V +A+GLEYLH Sbjct: 586 EVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSGKRG------GSILNWETRLKIVVESAQGLEYLH 706
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 53/133 (39.85%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 S+ E+K T +F +IG G +G VY G + G A+K+L+ S Q +EF ++ M+S+L+H + V L+GYC D VL YE+ +G+L D L R P LSW++R++I +GAA+GL+YLH Sbjct: 514 SIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKAS----DPPLSWKRRLEICIGAARGLQYLH 642
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 52/133 (39.10%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725 I ++ T NF LIG+G +G VY IL G AAIK+ S Q EF ++ ++SR++H + V L GYC + + +L YEF G+L + L+G P L+W+QR++I +GAA+GL+YLH Sbjct: 476 IPFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSN-------LPSLTWKQRLEICIGAARGLDYLH 601 The following BLAST results are available for this feature:
BLAST of CF835848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 242
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835848 ID=CF835848; Name=CF835848; organism=Citrus sinensis; type=EST; length=725bpback to top |