CF835848

Overview
NameCF835848
Unique NameCF835848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 51/130 (39.23%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            EL+  T+NF    ++G+G +G+VY G+L      A+K+L   + P  D  F  +V M+S   H N ++L+G+C   T R+L Y F  N SL    H  + +K     PVL W+ R +IA+GAA+G EYLH
Sbjct:  282 ELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSL---AHRLREIKAGD--PVLDWETRKRIALGAARGFEYLH 406          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19
Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            E+ ++T+NF    ++G+G +G VY+G +K     A+K L  +S Q  +EF A+V ++ R+ H N V L+GYC +G    L YEF  NG L   L G+ G        +++W  R++IA+ AA GLEYLH
Sbjct:  558 EVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGG------NSIINWSIRLRIALEAALGLEYLH 678          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-19
Identity = 51/129 (39.53%), Postives = 73/129 (56.59%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ELK  T++F  +  +GEG +G VY G L  G   A+K L   S+Q   +F+A++  +S ++H N V+L G C +G  R+L YE+  NGSL   L G K +        L W  R +I +G A+GL YLH
Sbjct:  685 ELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLH-------LDWSTRYEICLGVARGLVYLH 806          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            E+K  T NF    +IG GS+G VY G L  G   A+K + D ++   + F+ +V ++S+++H+N V   G+C +   ++L YE+ S GSL D L+G +  + +     L+W  R+K+AV AAKGL+YLH
Sbjct:  600 EIKSATRNF--KEVIGRGSFGAVYRGKLPDGKQVAVKVRFDRTQLGADSFINEVHLLSQIRHQNLVSFEGFCYEPKRQILVYEYLSGGSLADHLYGPRSKRHS-----LNWVSRLKVAVDAAKGLDYLH 721          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 70/219 (31.96%), Postives = 99/219 (45.21%), Query Frame = 3
Query:  159 IMSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASE------AAPKGAQAVKVQPIEVPAISV--DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK-GVK----------------GAQ----PGPVLSWQQRVKIAVGAAKGLEYLH 725
            I   FGC  +    +A D      VK      G +          A  K A AV V   E P +++   +L   T NF  + L+ +G +G VY G L  G   A+K L   S   D+E   ++  + R+KH N V L GYC+ G  R+  YE+  NG+L ++LH    GV+                G Q     GPV +W+ R KIA+G A+ L +LH
Sbjct:  473 IFVAFGCRRKTKSGEAKD----LSVKEEQSISGPFSFQTDSTTWVADVKQANAVPVVIFEKPLLNITFSDLLSATSNFDRDTLLADGKFGPVYRGFLPGGIHVAVKVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLH 687          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 54/180 (30.00%), Postives = 98/180 (54.44%), Query Frame = 3
Query:  192 DMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHA-AAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            D   A+D  + ++  S  G   +  +++    G+ A  +        S  E+K  T+NF  + ++G G +G+VY G +  G    AIK+ +  S+Q   EF  ++ M+S+L+H + V L+GYC +    +L Y++ ++G++ + L+  +        P L W+QR++I +GAA+GL YLH
Sbjct:  478 DYQPASDATSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLYKTQ-------NPSLPWKQRLEICIGAARGLHYLH 650          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  345 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++  T  F  +  +G G +G VY G L +G   AIK+L   S Q  EEF  +V +V++L+H N  +LLGYC+DG  ++L YEF  N SL   L   +  +      VL WQ+R KI  G A+G+ YLH
Sbjct:  340 IEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRR------VLDWQRRYKIIEGIARGILYLH 461          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 3
Query:  219 NAYMVKSSAGTDGAYHASEAAPKGAQAVKV-------------QPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +A +   S+G    Y A +    G++A  V             Q   + + S  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H + V+L+GYC++   R+L YEF   GSL + L  R+G+   QP   LSW+ R+K+A+GAAKGL +LH
Sbjct:    6 SAQVKAESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLF-RRGLY-FQP---LSWKLRLKVALGAAKGLAFLH 193          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 3
Query:  261 YHASEAAPKGAQAVKVQPIEVPA---------------ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +   +A+P    A    P+  P                 +  E++E+T NF  +  +GEG +G VY+G +      A+K L  +S Q  + F A+V ++ R+ H N V L+GYC +G    L YE+  NG L   L G+ G      G VLSW+ R+KI + AA GLEYLH
Sbjct:  529 FRKKKASPSNLHAPPSMPVSNPGHNSQSESSFTSKKIRFTYSEVQEMTNNF--DKALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSGKHG------GFVLSWESRLKIVLDAALGLEYLH 691          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 60/177 (33.90%), Postives = 92/177 (51.98%), Query Frame = 3
Query:  201 KAADNGNAYMVKSSAGT--DGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +A DNGN Y V ++A     G   ASE       A K       A  V +L+++     +  ++G+G++G  Y  +L +    A+K+L      D+EF  ++ +V  + HEN V L  Y      ++L Y+F   GSL  +LHG +G  G  P   L+W  R +IA+GAA+GL+YLH
Sbjct:  319 EAVDNGNVYSVSAAAAAAMTGNGKASEG---NGPATKKLVFFGNATKVFDLEDLLR--ASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMADKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGA-GRSP---LNWDVRSRIAIGAARGLDYLH 486          
The following BLAST results are available for this feature:
BLAST of CF835848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
Y5129_ARATH1.370e-1939.23Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.370e-1939.53Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y5614_ARATH1.789e-1939.53Probable LRR receptor-like serine/threonine-protei... [more]
Y5487_ARATH2.337e-1938.76Probable LRR receptor-like serine/threonine-protei... [more]
Y2242_ARATH2.337e-1931.96Probable LRR receptor-like serine/threonine-protei... [more]
FERON_ARATH2.337e-1930.00Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
CRK25_ARATH2.337e-1940.63Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
APK1A_ARATH2.337e-1933.68Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y2899_ARATH3.052e-1934.50Probable leucine-rich repeat receptor-like protein... [more]
Y1848_ARATH3.052e-1933.90Probable inactive receptor kinase At1g48480 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835848 ID=CF835848; Name=CF835848; organism=Citrus sinensis; type=EST; length=725bp
AAGCGCTTTACTACTTTTTTCTTCATCCTGCGCACCTATCGTCGTCTTAT
CCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATTCAAAATATCCAGCT
CGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAGAGGGGCATTATTGT
GGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCAT
AAAGCTGCTGACAATGGCAATGCATACATGGTTAAAAGTTCAGCAGGAAC
TGATGGAGCCTATCATGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTG
TGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAG
GAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATA
TGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAA
AAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTT
TCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTA
TTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATG
GATCTCTTCATGATATTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAG
CCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGC
TGCGAAAGGGCTTGAATACTTGCAT
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