CF835848

Overview
NameCF835848
Unique NameCF835848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            E++  T+NF     IG G +G+VY G L+ G   AIK+    S+Q   EF  ++ M+SRL+H + V L+G+C +    +L YE+ +NG+L   L G          P LSW+QR++  +G+A+GL YLH
Sbjct:  512 EIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSN-------LPPLSWKQRLEACIGSARGLHYLH 633          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            E+  IT NF    +IG+G +G+VY+G++ +G   A+K L + S Q  +EF A+V ++ R+ H N   L+GYC +    VL YE+ +N +L D L G++         +LSW++R+KI++ AA+GLEYLH
Sbjct:  568 EVVNITNNF--ERVIGKGGFGKVYHGVI-NGEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSF-------ILSWEERLKISLDAAQGLEYLH 686          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 49/128 (38.28%), Postives = 78/128 (60.94%), Query Frame = 3
Query:  345 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +K+ T NF  +  IG G +G+VY G L  G   A+K+ +  S+Q   EF  ++ M+S+ +H + V L+GYC +    +L YE+  NG++   L+G  G+      P L+W+QR++I +GAA+GL YLH
Sbjct:  478 VKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG-SGL------PSLTWKQRLEICIGAARGLHYLH 598          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.987e-19
Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +S+D++ + T +F    +IG G +G VY   L  G   AIK+L     Q D EF A+V  +SR +H N V LLGYC     ++L Y +  NGSL   LH +  V G    P L W+ R++IA GAA+GL YLH
Sbjct:  731 LSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEK--VDGP---PSLDWKTRLRIARGAAEGLAYLH 858          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 58/140 (41.43%), Postives = 83/140 (59.29%), Query Frame = 3
Query:  315 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSR--VLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            + V   S +EL+E T NF  +  +G+G +G VYYG LK G + A+K+L D + +  E+F  +V +++ L+H N V L G C    SR  +L YE+ +NG+L D LHG +    A P   L W  R+KIAV  A  L+YLH
Sbjct:  327 VGVHIFSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQ----ANPSS-LPWSIRLKIAVETASALKYLH 460          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ELK  T++F  +  +GEG +G VY G L  G   A+K L   S+Q   +F+A++  +S + H N V+L G C +G  R+L YE+  NGSL   L G K +        L W  R +I +G A+GL YLH
Sbjct:  686 ELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLH-------LDWSTRYEICLGVARGLVYLH 807          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 61/174 (35.06%), Postives = 98/174 (56.32%), Query Frame = 3
Query:  237 SSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S  G+ G+  AS +     +   +Q   +   S+ ELK  T NF  ++++GEG +G V+ G +           +G   A+K+L+    Q   E+LA+++ + +L H N V+L+GYC++   R+L YEF + GSL + L  R+G    QP   LSW  RV++A+GAA+GL +LH
Sbjct:   25 SRDGSKGSSTASFSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLF-RRGT-FYQP---LSWNTRVRMALGAARGLAFLH 193          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: MEE39_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MEE39 OS=Arabidopsis thaliana GN=MEE39 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 3
Query:  342 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            E+ E+T+N      +GEG +G VY+G L      A+K L   S Q  +EF A+V ++ R+ H N V L+GYC +     L YE+ SNG LH  L G+ G      G VL+W  R++IA+ AA GLEYLH
Sbjct:  560 EVMEMTKNL--QRPLGEGGFGVVYHGDLNGSEQVAVKLLSQTSAQGYKEFKAEVELLLRVHHINLVNLVGYCDEQDHFALIYEYMSNGDLHQHLSGKHG------GSVLNWGTRLQIAIEAALGLEYLH 680          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 52/132 (39.39%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S + L+  T+ F     +G+G  G VY G+L +G   A+K+L  + KQ  + F  +V+++S++ H+N V+LLG  + G   +L YE+ +N SLHD L  RK V   QP   L+W +R KI +G A+G+ YLH
Sbjct:  312 SYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDV---QP---LNWAKRFKIILGTAEGMAYLH 437          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.800e-19
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S  E++  T NF    ++G+G +G VY G L +G   A+K+L D     + +F  +V M+    H N ++L G+C+    R+L Y +  NGS+ D L    G K     P L W +R+ IA+GAA+GL YLH
Sbjct:  289 SFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEK-----PSLDWNRRISIALGAARGLVYLH 415          
The following BLAST results are available for this feature:
BLAST of CF835848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
Y1357_ARATH3.052e-1938.76Probable receptor-like protein kinase At1g30570 OS... [more]
SIRK_ARATH3.052e-1940.31Senescence-induced receptor-like serine/threonine-... [more]
HERK_ARATH3.052e-1938.28Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
PSKR1_DAUCA3.987e-1942.11Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y1839_ARATH5.207e-1941.43Probable serine/threonine-protein kinase At1g18390... [more]
Y1561_ARATH5.207e-1939.53Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH5.207e-1935.06Probable serine/threonine-protein kinase NAK OS=Ar... [more]
MEE39_ARATH5.207e-1942.64Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH5.207e-1939.39Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y5457_ARATH6.800e-1937.12Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835848 ID=CF835848; Name=CF835848; organism=Citrus sinensis; type=EST; length=725bp
AAGCGCTTTACTACTTTTTTCTTCATCCTGCGCACCTATCGTCGTCTTAT
CCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATTCAAAATATCCAGCT
CGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAGAGGGGCATTATTGT
GGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCAT
AAAGCTGCTGACAATGGCAATGCATACATGGTTAAAAGTTCAGCAGGAAC
TGATGGAGCCTATCATGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTG
TGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAG
GAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATA
TGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAA
AAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTT
TCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTA
TTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATG
GATCTCTTCATGATATTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAG
CCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGC
TGCGAAAGGGCTTGAATACTTGCAT
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