CF835848

Overview
NameCF835848
Unique NameCF835848
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: ACCR1_ARATH (Serine/threonine-protein kinase-like protein CCR1 OS=Arabidopsis thaliana GN=CCR1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.515e-18
Identity = 53/133 (39.85%), Postives = 74/133 (55.64%), Query Frame = 3
Query:  336 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK---QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            + ELK+ T  F     +G GSYG VY  +L  G   A+K+ +A+        EF  ++ ++  ++H N V LLGY  +   R+L YE+  +G+LHD LH      G  P   LSW  R+KIA+  AKGLEYLH
Sbjct:  510 LSELKDATNGFKEFNELGRGSYGFVYKAVLADGRQVAVKRANAATIIHTNTREFETELEILCNIRHCNIVNLLGYSTEMGERLLVYEYMPHGTLHDHLH-----SGFSP---LSWSLRIKIAMQTAKGLEYLH 634          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 47/137 (34.31%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  330 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD---ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL--HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            IS+  L+ +T NF ++ ++G G +G VY G L  G   A+K+++    + +   EF ++++++++++H + V LLGYC+DG  ++L YE+   G+L  H      +G+K     P+L W+QR+ +A+  A+G+EYLH
Sbjct:  576 ISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLK-----PLL-WKQRLTLALDVARGVEYLH 706          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: ERL1_ARATH (LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 56/155 (36.13%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  270 SEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S    +G   + +  +++   + D++  +TEN     +IG G+   VY   LKS    AIK+L  ++ P    EF  ++  +  ++H N V L GY +  T  +L Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH
Sbjct:  616 SSKQAEGLTKLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASSTVYKCALKSSRPIAIKRL-YNQYPHNLREFETELETIGSIRHRNIVSLHGYALSPTGNLLFYDYMENGSLWDLLHGSLKKVK-------LDWETRLKIAVGAAQGLAYLH 762          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 49/128 (38.28%), Postives = 79/128 (61.72%), Query Frame = 3
Query:  345 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            L++ TE+F  +  +G+G  G VY GIL  G   A+KKL  + ++  ++F  +V+++S ++H+N V+LLG  ++G   +L YE+  N SL  IL  +  V       +LSW+QR  I +G ++GLEYLH
Sbjct:  311 LEKATESFHDSMKLGQGGAGSVYKGILPDGRIVAVKKLFFNTREWADQFFNEVNLISGVQHKNLVRLLGCSIEGPKSLLVYEYVHNRSLDQILFMKNTVH------ILSWKQRFNIIIGISEGLEYLH 432          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 56/151 (37.09%), Postives = 86/151 (56.95%), Query Frame = 3
Query:  306 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            +Q   + + +  ELK  T NF  ++++GEG +G V+ G +           +G   A+KKL+    Q  +E+LA+V+ + +  H N V+L+GYC++   R+L YEF   GSL + L  R      QP   LSW  R+K+A+GAAKGL +LH
Sbjct:   49 LQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSY--FQP---LSWTLRLKVALGAAKGLAFLH 194          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  345 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE-EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            L++ T +F     +GEG +G VY G+L  G   A+K+L  + Q  E EF  +  +V++L+H N V+LLGY ++GT R+L YEF  + SL       K +     G  L W+ R KI  G A+GL YLH
Sbjct:  337 LQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLD------KFIFDPIQGNELEWEIRYKIIGGVARGLLYLH 458          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  318 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++   S+ EL+  ++NF    ++G G +G+VY G L  G   A+K+L   +    E  F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R      +  P L W +R +IA+G+A+GL YLH
Sbjct:  273 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER-----PESQPPLDWPKRQRIALGSARGLAYLH 405          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 3
Query:  318 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++   S+ EL+  ++ F    ++G G +G+VY G L  G   A+K+L   + P  E  F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R   +     P L W  R +IA+G+A+GL YLH
Sbjct:  286 QLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQ-----PPLDWPTRKRIALGSARGLSYLH 418          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18
Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 3
Query:  333 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCV-----DGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            S DE+K+ T NF  + +IG G YG V+ G L  G   A K+  + S   D  F  +V +++ ++H N + L GYC      +G  R++  +  SNGSLHD L G    +       L+W  R +IA+G A+GL YLH
Sbjct:  272 SFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQ-------LAWPLRQRIALGMARGLAYLH 401          
BLAST of CF835848 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18
Identity = 52/130 (40.00%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  345 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH--GRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLH 725
            ++  T++F  +  IG+G +G VY G L  G   A+K+L  S  Q + EF  +V +V++L+H N V+LLG+C+DG  RVL YE+  N SL   L    +KG         L W +R KI  G A+G+ YLH
Sbjct:  330 IQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKG--------QLDWTRRYKIIGGVARGILYLH 451          
The following BLAST results are available for this feature:
BLAST of CF835848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 242
Match NameE-valueIdentityDescription
ACCR1_ARATH1.515e-1839.85Serine/threonine-protein kinase-like protein CCR1 ... [more]
TMK1_ARATH1.978e-1834.31Probable receptor protein kinase TMK1 OS=Arabidops... [more]
ERL1_ARATH1.978e-1836.13LRR receptor-like serine/threonine-protein kinase ... [more]
CRK1_ARATH1.978e-1838.28Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
APK1B_ARATH1.978e-1837.09Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
CRK26_ARATH2.584e-1839.84Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
BAK1_ARATH2.584e-1834.78BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH3.375e-1834.78Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
RKF3_ARATH3.375e-1837.23Probable LRR receptor-like serine/threonine-protei... [more]
CRK10_ARATH3.375e-1840.00Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835848 ID=CF835848; Name=CF835848; organism=Citrus sinensis; type=EST; length=725bp
AAGCGCTTTACTACTTTTTTCTTCATCCTGCGCACCTATCGTCGTCTTAT
CCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATTCAAAATATCCAGCT
CGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAGAGGGGCATTATTGT
GGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCAT
AAAGCTGCTGACAATGGCAATGCATACATGGTTAAAAGTTCAGCAGGAAC
TGATGGAGCCTATCATGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTG
TGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAG
GAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATA
TGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAA
AAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTT
TCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTA
TTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATG
GATCTCTTCATGATATTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAG
CCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGC
TGCGAAAGGGCTTGAATACTTGCAT
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