CF835849

Overview
NameCF835849
Unique NameCF835849
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.975e-69
Identity = 118/187 (63.10%), Postives = 144/187 (77.01%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFV---SPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCC---NSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GGRQL++G++W ITA  GT AARIWART CQFDASG+G C TGDC G+++C GYG APNTLAEYALKQFN++DF D+S +DGFNVP  +SF+      C+R  +C  ++   CP EL+  G CN  CPVFK DEYCC    + NC PT +S++FK +CPD YSYPKDDATSTFTCP+GT+YKVVFCP
Sbjct:   22 GGRQLNRGESWRITAPAGTTAARIWARTGCQFDASGRGSCRTGDCGGVVQCTGYGRAPNTLAEYALKQFNNLDFFDISILDGFNVP--YSFLPDGGSGCSRGPRCAVDVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.851e-68
Identity = 116/183 (63.39%), Postives = 139/183 (75.96%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNS--GNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GGRQL+ GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG  PNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN PC V KT+E+CC +  G+CGPT  S+FFK RCPD YSYP+DD  S FTCP GT+Y+VVFCP
Sbjct:   46 GGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68
Identity = 114/184 (61.96%), Postives = 137/184 (74.46%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVFCP 742
            GGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S+FFK RCPD YSYP+DD TSTFTC S  TDYKV+FCP
Sbjct:   44 GGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.352e-68
Identity = 114/184 (61.96%), Postives = 137/184 (74.46%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRV--IKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPS-GTDYKVVFCP 742
            GGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN PC  F   +YCC  G CGPT  S++FK RCPD YSYP+DD TSTFTC S  TDYKV+FCP
Sbjct:   44 GGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.852e-59
Identity = 103/182 (56.59%), Postives = 132/182 (72.53%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GGRQL+ G++WTI   PGTK  +IWART C FD SG+G C TGDC GLL+C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM+FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   49 GGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGRGICRTGDCGGLLQCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMDFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 227          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.675e-58
Identity = 102/182 (56.04%), Postives = 129/182 (70.88%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRVIKCTANILGECPNELKVP-GGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GGRQL+ G++WTI   PGT   +IWART C FD SG G C+TGDC GLL C+ +G  P TLAE++L Q+   D+ID+SNI GFNVPM FS  +  C R ++C A+I+G+CP +LK P GGCN  C VF+T EYCC +G CGPT +S+FFK  CPD +SY  D  T T TCP  ++Y+V FCP
Sbjct:   27 GGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYG-KDYIDISNIKGFNVPMNFSPTTRGC-RGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPT-TVTCPGSSNYRVTFCP 205          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.514e-56
Identity = 101/184 (54.89%), Postives = 124/184 (67.39%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSG---NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GG++LD+GQTWT+  A GT +AR W RT C FDASGKG C+TGDC G L C   GA P TLAEY     +D D+ D+S +DGFN+P+  +  +  C     C A+I   CP+ELKV GGCN  C VFKTD+YCC +    NC  T +SK FK++CP  YSY KDD T+TF C SGTDY +VFCP
Sbjct:   47 GGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGGQLSCTVSGAVPATLAEYTQ---SDQDYYDVSLVDGFNIPLAINPTNAQCT-APACKADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.245e-38
Identity = 86/193 (44.56%), Postives = 109/193 (56.48%), Query Frame = -3
Query:  200 GGRQLDKGQTWTITAAPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEF--SFVSPSCNRVIKCTANILGECPNELKVPG-----GCNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 742
            GG +L  G +  +TA  G  + R WART C FDASG G+C TGDC G L C G G  P TLAE+ L      DF D+S +DG+NV +    S  S  C +   C +++   CP+ LKV        C   C  F TD+YCC   N     C PT +S+ FK+ CPD YSY  DD TSTFTC +G +Y++ FCP
Sbjct:   51 GGFELTPGASRQLTAPAGW-SGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGVPPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSGDC-KYAGCVSDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.746e-33
Identity = 81/196 (41.33%), Postives = 105/196 (53.57%), Query Frame = -3
Query:  200 GRQLDKGQTWTITA-APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFS--FVSPSCNRVIKCTANILGECPNELKVPG------GCNGPCPVFKTDEYCCNSG-----NCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 739
            G +L  G + ++T  AP +   R W R+ C  D+SGK KC TGDC +G + C G GA+P  +L E  L      DF D+S +DGFN+P++ +    S  CN    C ANI   CP EL   G      GC   C      +YCC         C PT FSK FK++CP  YSY  DD +STFTC  G +Y++ FCP
Sbjct:   52 GFELASGASTSLTVQAPWS--GRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSGDCNST-SCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of CF835849 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.634e-31
Identity = 73/183 (39.89%), Postives = 94/183 (51.37%), Query Frame = -3
Query:  200 APGTKAARIWARTKCQFDASGKGKCETGDC-NGLLECQGYGAAPN-TLAEYALKQFNDMDFIDMSNIDGFNVPMEFSFVSPSCN----RVIKCTANILGECPNELKVPGG------CNGPCPVFKTDEYCCNSGN-----CGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPSGTDYKVVFCP 697
            AP   + R W RT+C  DA+GK  CET DC +G + C G GA P  TL E  +      D+ D+S +DGFN+PM    V+P       +   C AN+   CP +L+V         C   C  F   +YCC   N     C PT +S+ F+ +CP  YSY  DD  STFTC  G DY + FCP
Sbjct:   33 APSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMS---VAPQGGTGECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
The following BLAST results are available for this feature:
BLAST of CF835849 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
IAAT_MAIZE1.975e-6963.10Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
PRR2_TOBAC2.851e-6863.39Pathogenesis-related protein R minor form OS=Nicot... [more]
OS35_SOLCO3.724e-6861.96Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
OLPA_TOBAC6.352e-6861.96Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
THM2_THADA1.852e-5956.59Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA2.675e-5856.04Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS9.514e-5654.89Pathogenesis-related protein OS=Juniperus ashei PE... [more]
PR5_ARATH5.245e-3844.56Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.746e-3341.33Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TP1B_MALDO1.634e-3139.89Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835849 ID=CF835849; Name=CF835849; organism=Citrus sinensis; type=EST; length=744bp
TTTTTTTTTTTTTTTTTAAAAGAAGCCCCCTAAAATTTCAGTTATTCTCC
TTTTTAATTCACGCACATAACTACATGGGCCTGCTCCAGCTCTATGGCAG
TGAAAACCGCACGGTCCTTATTCCAATATTATAACAAATACAGAAGACTA
CGTCGTATAGTTTTCTATTTCCATTTCTACCCCTGAAAAAAATGCTTCAG
GGGCAAAATACAACCTTGTAGTCGGTCCCACTCGGGCAAGTAAATGTGCT
GGTAGCGTCATCCTTAGGGTAACTGTAAACATCCGGGCACCTATCCTTGA
AAAACTTGGAAAAACCTGTAGGTCCGCAGTTGCCTGAATTGCAACAGTAC
TCGTCGGTCTTGAACACGGGGCACGGCCCGTTACATCCTCCAGGAACCTT
CAATTCATTAGGGCACTCCCCAAGAATGTTAGCAGTGCACTTGATCACGC
GGTTGCATGAGGGAGAAACAAAGCTAAATTCCATGGGAACATTGAATCCG
TCAATGTTGGACATGTCAATGAAATCCATGTCATTGAATTGCTTCAACGC
GTACTCGGCCAAGGTGTTAGGTGCTGCACCGTAGCCTTGGCACTCGAGGA
GTCCGTTACAGTCACCGGTCTCGCATTTGCCTTTGCCGGAAGCATCAAAC
TGGCATTTGGTTCGAGCCCAAATGCGGGCTGCTTTTGTGCCTGGCGCGGC
GGTGATGGTCCATGTTTGACCCTTGTCGAGTTGCCTGCCGCCTC
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