CF835861

Overview
NameCF835861
Unique NameCF835861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.130e-20
Identity = 63/194 (32.47%), Postives = 100/194 (51.55%), Query Frame = 2
Query:  128 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706
            +R  L    ALVT  T GIG AI   L   GA V   SR +  ++  +   K +GL V+G+ C +    +R++L+ T   +  G ++IL++NA  +       +   E +  I+  N ++   L++   P +   G G+I+ +SS+      P    Y  +K A+  LTKNLA E  + N+RVN +AP +IRTS
Sbjct:    8 RRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAV-KLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTS 200          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 4.746e-20
Identity = 64/197 (32.49%), Postives = 99/197 (50.25%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGA-IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            L   TA+VTG +RGIG +I  +L   GA +V   S NE + NE + E KS G K      D+    + Q +++   S F   ++ILVNNAG T          +++  ++  N +  ++ ++     +    +G II +SS+ GV   P  + Y + K  +  LTK+ A E    NI VNA+AP  I T + D + K
Sbjct:    2 LNDKTAIVTGASRGIGRSIALDLAKSGANVVVNYSGNEAKANEVVDEIKSMGRKAIAVKADVSNPEDVQNMIKETLSVFS-TIDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVGVSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAK 197          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.804e-19
Identity = 63/191 (32.98%), Postives = 98/191 (51.31%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            +L   T L+TGG  GIG+A V+      A V     +E +    ++  K    ++     D+   A  Q  +E+    F G L++L+NNAG  I     E  + D++ ++  N    + +S+ A   + A+G GNII   SV G++A P    Y ++KG + QLTK++A ++ K  IRVN V P II T L
Sbjct:    2 NLTDKTVLITGGASGIGYAAVQAFLGQQANVVVADIDEAQGEAMVR--KENNDRLHFVQTDITDEAACQHAVESAVHTFGG-LDVLINNAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPAYNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPL 189          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_RAT (Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19
Identity = 60/189 (31.75%), Postives = 96/189 (50.79%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRT 703
            L    ALVT  T GIG AI   L   GA V   SR +  ++  +   + +GL V+G  C +    +R+KL+        G ++ILV+NA          + T E ++ +++ N  ++  + +   P ++  G G+++ +SSV G +  P    Y  +K A+  LTKN A E    NIRVN +AP +I+T
Sbjct:   12 LANKVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAEDREKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKT 199          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.356e-19
Identity = 62/198 (31.31%), Postives = 96/198 (48.48%), Query Frame = 2
Query:  113 SESREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRT 703
            S    +R  L    ALVT  T GIG AI   L   GA V   SR +  ++  +   + +GL V+G  C +    +R+KL+ T      G ++ILV+NA          + T E +  +++ N  +   + +   P ++  G G+++ + SV G    P    Y  +K A+  LTKN A E    NIRVN +AP +I+T
Sbjct:    3 SSGLTRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKT 199          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 58/194 (29.90%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721
            L+G   L+TG   GIG A        GA V     ++  L+  ++E +    KV     ++  R + ++++E V  ++ G++++LVNNAG T          ED+  ++  N +  ++++Q+  P +    NG+I+ +SSV G+   P  + YA++K  +  +TK  A E    NIRVNAVAP  I T + + +
Sbjct:    3 LEGKVCLITGAASGIGKATTLLFAQEGATVIAGDISKENLDSLVKEAEGLPGKVDPYVLNVTDRDQIKEVVEKVVQKY-GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVGIYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKL 195          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 64/196 (32.65%), Postives = 99/196 (50.51%), Query Frame = 2
Query:  155 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-----NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727
            ALVTG T GIG AI   L A GA    C+R+E  L + ++E + +G  V G+ CD+   A+ +  +      + G ++ILVNNAG +      E   E +  ++TTN  S + +++    +L A G      G II I+S  G   V     Y+++K  +  LTK L  E  +  I VNAV P  + T + + + +
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVFLMTK---EVLNAGGMLAKKRGRIINIASTGGKQGVVHAVPYSASKHGVVGLTKALGLELARTGITVNAVCPGFVETPMAERVRE 211          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.248e-19
Identity = 62/195 (31.79%), Postives = 101/195 (51.79%), Query Frame = 2
Query:  125 EQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706
            E+R  L+   ALVT  T GIG AI   L   GA V   SR +  ++  +   + +GL V+G+ C +    +R++L+  +     G ++ILV+NA          + T E +  I+  N ++   +++   P ++  G G+++ +SSV      P    Y  +K A+  LTKNLA E    NIRVN +AP +I+T+
Sbjct:    7 ERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLV-AMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTN 200          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.854e-19
Identity = 65/196 (33.16%), Postives = 101/196 (51.53%), Query Frame = 2
Query:  134 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTC-SRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFST-IMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIA--VPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            +SLKG T L+TGG+ GIG +I +   A G+ V     RN+  L    +     G++    +C ++ R+   +       E  G+L++++ NAG  IP  + E   ED  T ++  N   AY+ +Q A    K  G G++IF +S++G IA      + Y +TK A+  L + LA EW     RVN+V+P  I T L
Sbjct:    5 FSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFARVNSVSPGYIDTDL 199          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.854e-19
Identity = 62/199 (31.16%), Postives = 101/199 (50.75%), Query Frame = 2
Query:  113 SESREQRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706
            S    +R  L    ALVT  T GIG AI   L   GA V   SR +  +++ +   + +GL V+G+ C +    +R++L+ T   +  G ++ILV+NA          + T E +   +  N ++   +++   P ++  G G+++ +SS+      P  S Y  +K A+  LTK LA E    NIRVN +AP +I+TS
Sbjct:    3 SSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAV-KLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTS 200          
The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
DHRS4_BOVIN2.130e-2032.47Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
FABG_BACSU4.746e-2032.493-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
BACC_BACSU1.804e-1932.98Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
DHRS4_RAT2.356e-1931.75Dehydrogenase/reductase SDR family member 4 OS=Rat... [more]
DHRS4_MOUSE2.356e-1931.31Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
FABG_THEMA3.076e-1929.903-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
DHK1_STRVN3.076e-1932.65Granaticin polyketide synthase putative ketoacyl r... [more]
DHRS4_PIG5.248e-1931.79Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
SOU1_SCHPO6.854e-1933.16Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
DHRS4_PONAB6.854e-1931.16Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bp
CAACACCCACTCCATTTGCAAAAATATTAAGATTCTCCTATTAAATACAA
CAAATTGCTATTGTTCTCATAAGAGAAGAATAATTTCAGTTTCTGATACC
CGGAAAAACATGTCAGAATCCAGAGAACAAAGGTGGTCTCTAAAGGGTAT
GACCGCGCTTGTAACAGGTGGAACCAGAGGCATCGGACACGCAATAGTGG
AAGAACTAACGGCATTTGGAGCAATAGTGCATACATGTTCACGTAATGAA
ACAGAGCTCAATGAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTAAAGT
AAGCGGCTCGGCATGTGACCTGAAAATTAGAGCTGAGCGTCAAAAGTTGA
TGGAGACTGTATGTTCTGAATTTGATGGCAAGCTCAACATCCTTGTAAAC
AATGCTGGAACCACCATTCCTAAGGAAGCCACAGAATTTACCATGGAGGA
TTTCTCGACTATAATGACCACCAATTTCGAGTCTGCTTACCACCTGTCCC
AACTTGCATACCCCCTACTCAAAGCATCAGGAAATGGAAACATCATTTTT
ATCTCCTCTGTCACGGGTGTTATAGCTGTACCTCTATGTTCCATCTATGC
ATCAACTAAAGGAGCAATGAATCAACTGACAAAGAACTTGGCATGTGAGT
GGGGAAAGGACAACATTCGCGTGAATGCAGTTGCTCCATGGATCATTAGA
ACCTCTCTCATTGATTCCATAGAAAAGG
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