CF835861
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18 Identity = 61/197 (30.96%), Postives = 104/197 (52.79%), Query Frame = 2 Query: 140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTG-VIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSIEK 727 L G TAL+TG +GIG I GA + + E+ + E +G + + D++ A ++ E +G+++ILVNNAG + + +D + N + +++++ P + A +G I+ +SSVTG ++A P + YA TK A+ LTK+LA E+ + IRVNA+ P +RT + +SI + Sbjct: 4 LTGKTALITGALQGIGEGIARTFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA-KEKEGRIDILVNNAGVCRLGSFLDMSDDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIAR 198
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18 Identity = 65/195 (33.33%), Postives = 100/195 (51.28%), Query Frame = 2 Query: 134 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNG----NIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706 +SL+G A+VTG G+G + L G + N E E I++ + G + DL+ L++ +EF G ++ILVNNAG ++A EF+ +D+ +M N +S + +SQ A A GNG NI + S G I VP Y ++K + +T+ +A EW K NI VNA+AP + T+ Sbjct: 6 FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDI--VGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLDRAVAEF-GHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18 Identity = 59/194 (30.41%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 128 QRWSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTT-IPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTS 706 +R L A+VT T GIG AI L GA V SR + ++ + +++GL V+G+ C + +R++L+ T + G ++ILV+NA + + T E + I+ N ++ +++ P ++ G G+++ ++S+ Y +K A+ LTKNLA E NIRVN +AP +I+TS Sbjct: 8 RRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALN-LHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTS 200
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 67/199 (33.67%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 140 LKGMTALVTGGT--RGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK--SKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVT-----GVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709 LKG TA+++G RGIG A E + GA V N E + G + G CD+ RA + V S F G NIL+NNAG T P + + + D+ I+ N +LSQ+ P ++ +G G+I +SSV+ G+ P Y++ K + L K +A E+G D+IRVN V P +I+T + Sbjct: 3 LKGKTAVISGAASKRGIGRATAELFASHGARVAILDINADEAKAAAGDLPPVEHGAHI-GLRCDVADRASCTSASDEVLSAF-GVANILINNAGITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIFGGP---HYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDI 196
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAW (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MW2) GN=fabG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAS (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MSSA476) GN=fabG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain MRSA252) GN=fabG PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain N315) GN=fabG PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAM (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=fabG PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_STAAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus aureus (strain COL) GN=fabG PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/193 (32.12%), Postives = 103/193 (53.37%), Query Frame = 2 Query: 152 TALVTGGTRGIGHAIVEELTAFG---AIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSLIDSI 721 +ALVTG +RGIG +I +L G A+ + S+ + E ++E K+KG+ ++ E + +++ V S+F G L++LVNNAG T +++ ++ TN + ++ Q A P + +G II +SSV G + P + Y +TK + LTK+ A E I VNAVAP I + + D++ Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAV--VEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL 195 The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 265
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bpback to top |