CF835861

Overview
NameCF835861
Unique NameCF835861
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18
Identity = 66/191 (34.55%), Postives = 95/191 (49.74%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASG-NGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L G   LVTG  +GIG   V+ L A GA V   SR + +L+  ++E       +     DL      ++ + +V     G +++LVNNA   + +   E T E F      N  +   +SQ+    L A G  G I+ +SS     AV   S+Y STKGA++ LTK +A E G   IRVNAV P ++ TS+
Sbjct:    5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVDLGDWEATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: YOXD_BACSU (Uncharacterized oxidoreductase yoxD OS=Bacillus subtilis GN=yoxD PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17
Identity = 58/191 (30.37%), Postives = 100/191 (52.36%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            SL+  TAL+TGG RGIG A    L   G  +    R    + +  +E K+ G+K + +A D+K   +  + +  V  +  G ++IL+NNAG +      + + +++  I+  N    YH+++   P +     G+II ISS  G     + S Y+++K A+  LT++L  E  K NIRV+A+ P  + + +
Sbjct:    3 SLQHKTALITGGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEVKALGVKAAFAAADVKDADQVNQAVAQVKEQL-GDIDILINNAGISKFGGFLDLSADEWENIIQVNLMGVYHVTRAVLPEMIERKAGDIINISSTAGQRGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASDM 192          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17
Identity = 65/190 (34.21%), Postives = 100/190 (52.63%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGA---IVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIA-VP--LCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAP 688
            SLKG  A+V GG RGIGHAI       GA   IV+  +  E    E  Q   + G+K     CD+ I  E +     +   FD  ++I+V N G    K A + T E+F+  +  N    ++++  A P+ +  G+G+++  +S++GV+  VP   C+ Y ++K  + QL K+LA EW K   RVN V+P
Sbjct:   18 SLKGKNAVVFGGARGIGHAICSVFAEAGANAFIVYNTTPGEKAAKEIAQ---ANGVKTYTCKCDVTIPKEVEHAFAEIQKVFD-TIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCA-YNTSKAGVIQLIKSLAVEWRK-FARVNCVSP 201          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: PECR_HUMAN (Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sapiens GN=PECR PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17
Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWK-----SKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWII 697
            L+G  A+VTGG  GIG AIV+EL   G+ V   SR    L     E +     +K  +V    C+++   E   L+++    F GK+N LVNN G      A   + + +  ++ TN    +++ +  Y        G+I+ I   T     PL     + +  +  LTK+LA EW    IR+N VAP +I
Sbjct:   16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA-GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVI 204          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: HDHA_CLOSO (NADP-dependent 7-alpha-hydroxysteroid dehydrogenase OS=Clostridium sordellii PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 65/191 (34.03%), Postives = 97/191 (50.79%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMED---FSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRT 703
            L+   ALVT  TRGIG A   +L   GAIV+   R      E   ++K +GL +     D       +++++T+    +GK++ILVNN GT  P++  +    D   F  +   N  S Y LS+L  P +  +  G+I+ ISSV G I       Y  +K  +N +TK +A ++ K  IR NAV P +I T
Sbjct:    4 LENKVALVTSATRGIGLASAIKLAQNGAIVYMGVRRLEATQEICDKYKEEGLILKPVFFDAYNIDIYKEMIDTIIKN-EGKIDILVNNFGTGRPEKDLDLVNGDEDTFFELFNYNVGSVYRLSKLIIPHMIENKGGSIVNISSVGGSIPDISRIGYGVSKSGVNNITKQIAIQYAKYGIRCNAVLPGLIAT 193          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: FABG_CHLMU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia muridarum GN=fabG PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 64/192 (33.33%), Postives = 100/192 (52.08%), Query Frame = 2
Query:  140 LKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSK-GLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHL-SQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            L    A+VTGG+RGIG  I +     GA V     NE       Q+   K G KVS +  D+         ++   +E+ G ++++VNNAG T        + E++S+++ TN  S Y++ S +  P++KA  +G I+ ISS+ G+   P  + YA+ K  +   +K L+ E G  NIRVN +AP  I T +
Sbjct:    5 LVNKAAIVTGGSRGIGFGIAKLFAEHGANVQIWGINEEAGKSAAQDLSDKTGSKVSFALVDVSKNDMVSAQVQKFLAEY-GTIDVVVNNAGITRDSLLMRMSEEEWSSVIDTNLGSIYNVCSAVIRPMIKAR-SGAIVNISSIVGLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDM 194          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: CBR2_MOUSE (Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 62/192 (32.29%), Postives = 95/192 (49.48%), Query Frame = 2
Query:  137 SLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQL-AYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            +  G+ ALVTG  +GIG   V+ L A GA V   +R  ++L    +E       +     DL      +K +  +     G +++LVNNA   I +   E T E F    + N  S + +SQ+ A  ++     G+I+ +SS+   +  P    Y+STKGAM  LTK +A E G   IRVN+V P ++ T +
Sbjct:    4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVDLGDWDATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: YGCW_ECOLI (Uncharacterized oxidoreductase ygcW OS=Escherichia coli (strain K12) GN=ygcW PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 61/194 (31.44%), Postives = 96/194 (49.48%), Query Frame = 2
Query:  134 WSLKGMTALVTGGTRGIGHAIVEELTAFGAIVHTCS--RNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            +SLKG TA+VTGG  G+G A    L   GA +   S  ++  E  E I++   +G++V      +      QK++   C  F G ++ILVNNAG     +  +F   D+  ++  N  +A+ LS  A  ++    +G II I S+   +       Y++TK A+   TK    E G+ NI+VN +AP    T +
Sbjct:   14 FSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEK---QGVEVDFMQVGITAEGAPQKIIAACCERF-GTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDI 203          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y2478_STAAM (Uncharacterized oxidoreductase SAV2478 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2478 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 51/185 (27.57%), Postives = 102/185 (55.14%), Query Frame = 2
Query:  155 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            A+VTG   GIG AI   L   GA V    RN+ +L     +     +KV  +  D+  + E  +LM+     F G L+I++N+AG  +  + T++ ++++ +++  N +   + +Q A P +    +G++I I+S++G       +IY++TK A++ +T+ L  E  K  ++V +++P ++ T++
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
BLAST of CF835861 vs. ExPASy Swiss-Prot
Match: Y2266_STAAN (Uncharacterized oxidoreductase SA2266 OS=Staphylococcus aureus (strain N315) GN=SA2266 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17
Identity = 51/185 (27.57%), Postives = 102/185 (55.14%), Query Frame = 2
Query:  155 ALVTGGTRGIGHAIVEELTAFGAIVHTCSRNETELNERIQEWKSKGLKVSGSACDLKIRAERQKLMETVCSEFDGKLNILVNNAGTTIPKEATEFTMEDFSTIMTTNFESAYHLSQLAYPLLKASGNGNIIFISSVTGVIAVPLCSIYASTKGAMNQLTKNLACEWGKDNIRVNAVAPWIIRTSL 709
            A+VTG   GIG AI   L   GA V    RN+ +L     +     +KV  +  D+  + E  +LM+     F G L+I++N+AG  +  + T++ ++++ +++  N +   + +Q A P +    +G++I I+S++G       +IY++TK A++ +T+ L  E  K  ++V +++P ++ T++
Sbjct:    9 AVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPT--DVTNKEEVDELMKIAQQTFGG-LDIVINSAGQMLSSKITDYQVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMVDTAI 190          
The following BLAST results are available for this feature:
BLAST of CF835861 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
DCXR_HUMAN9.896e-1834.55L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
YOXD_BACSU1.293e-1730.37Uncharacterized oxidoreductase yoxD OS=Bacillus su... [more]
YF3H_SCHPO1.293e-1734.21Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
PECR_HUMAN1.688e-1730.89Peroxisomal trans-2-enoyl-CoA reductase OS=Homo sa... [more]
HDHA_CLOSO2.205e-1734.03NADP-dependent 7-alpha-hydroxysteroid dehydrogenas... [more]
FABG_CHLMU2.205e-1733.333-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
CBR2_MOUSE2.205e-1732.29Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cb... [more]
YGCW_ECOLI3.761e-1731.44Uncharacterized oxidoreductase ygcW OS=Escherichia... [more]
Y2478_STAAM3.761e-1727.57Uncharacterized oxidoreductase SAV2478 OS=Staphylo... [more]
Y2266_STAAN3.761e-1727.57Uncharacterized oxidoreductase SA2266 OS=Staphyloc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A11_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835861 ID=CF835861; Name=CF835861; organism=Citrus sinensis; type=EST; length=728bp
CAACACCCACTCCATTTGCAAAAATATTAAGATTCTCCTATTAAATACAA
CAAATTGCTATTGTTCTCATAAGAGAAGAATAATTTCAGTTTCTGATACC
CGGAAAAACATGTCAGAATCCAGAGAACAAAGGTGGTCTCTAAAGGGTAT
GACCGCGCTTGTAACAGGTGGAACCAGAGGCATCGGACACGCAATAGTGG
AAGAACTAACGGCATTTGGAGCAATAGTGCATACATGTTCACGTAATGAA
ACAGAGCTCAATGAAAGAATTCAAGAATGGAAGAGTAAGGGGCTTAAAGT
AAGCGGCTCGGCATGTGACCTGAAAATTAGAGCTGAGCGTCAAAAGTTGA
TGGAGACTGTATGTTCTGAATTTGATGGCAAGCTCAACATCCTTGTAAAC
AATGCTGGAACCACCATTCCTAAGGAAGCCACAGAATTTACCATGGAGGA
TTTCTCGACTATAATGACCACCAATTTCGAGTCTGCTTACCACCTGTCCC
AACTTGCATACCCCCTACTCAAAGCATCAGGAAATGGAAACATCATTTTT
ATCTCCTCTGTCACGGGTGTTATAGCTGTACCTCTATGTTCCATCTATGC
ATCAACTAAAGGAGCAATGAATCAACTGACAAAGAACTTGGCATGTGAGT
GGGGAAAGGACAACATTCGCGTGAATGCAGTTGCTCCATGGATCATTAGA
ACCTCTCTCATTGATTCCATAGAAAAGG
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